Detailed information    

insolico Bioinformatically predicted

Overview

Name   hns   Type   Regulator
Locus tag   P3S51_RS01310 Genome accession   NZ_CP121303
Coordinates   270927..271253 (+) Length   108 a.a.
NCBI ID   WP_311918436.1    Uniprot ID   -
Organism   Acinetobacter sp. ANC 7201     
Function   repress the expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 265927..276253
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P3S51_RS01285 (P3S51_01285) hemC 266650..267567 (+) 918 WP_311918149.1 hydroxymethylbilane synthase -
  P3S51_RS01290 (P3S51_01290) - 267569..268348 (+) 780 WP_311918150.1 uroporphyrinogen-III synthase -
  P3S51_RS01295 (P3S51_01295) - 268345..269166 (+) 822 WP_311918151.1 hypothetical protein -
  P3S51_RS01300 (P3S51_01300) - 269170..270363 (+) 1194 WP_311918152.1 heme biosynthesis protein HemY -
  P3S51_RS01305 (P3S51_01305) - 270372..270803 (+) 432 WP_248103836.1 thioesterase family protein -
  P3S51_RS01310 (P3S51_01310) hns 270927..271253 (+) 327 WP_311918436.1 H-NS histone family protein Regulator
  P3S51_RS01315 (P3S51_01315) - 271422..272147 (+) 726 WP_311918153.1 FHA domain-containing protein -
  P3S51_RS01320 (P3S51_01320) - 272209..272877 (+) 669 WP_311918154.1 phosphoglycolate phosphatase -
  P3S51_RS01325 (P3S51_01325) trpE 273000..274493 (+) 1494 WP_311918155.1 anthranilate synthase component I -

Sequence

Protein


Download         Length: 108 a.a.        Molecular weight: 12215.08 Da        Isoelectric Point: 9.5383

>NTDB_id=811734 P3S51_RS01310 WP_311918436.1 270927..271253(+) (hns) [Acinetobacter sp. ANC 7201]
MMPDISNMSVEQLKRLQLEAEALIASKKDQAIEDAYNQILAIAESVGLSVDQIVEFGSVKRKKGIRKAVEPRYRNKGNTE
ETWTGRGKQPRWLVAQLEKGAKLEDFLI

Nucleotide


Download         Length: 327 bp        

>NTDB_id=811734 P3S51_RS01310 WP_311918436.1 270927..271253(+) (hns) [Acinetobacter sp. ANC 7201]
ATAATGCCAGATATTAGTAATATGTCTGTTGAACAGTTAAAACGTTTACAGCTTGAAGCTGAAGCTTTAATTGCATCTAA
AAAAGATCAAGCAATAGAAGATGCATATAATCAAATTTTAGCAATTGCTGAAAGTGTTGGTTTATCTGTAGACCAGATTG
TTGAGTTTGGCTCTGTTAAACGTAAAAAAGGCATACGTAAAGCAGTAGAACCTAGATACCGTAATAAGGGTAATACTGAA
GAAACTTGGACTGGTCGTGGTAAACAACCTCGTTGGTTAGTTGCACAACTTGAAAAAGGTGCAAAATTAGAAGATTTTCT
TATTTAA

Domains

Predicted by InterproScan.

H-NS histone family (Histone_HNS)

(12-102)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  hns Acinetobacter baumannii strain A118

80.556

100

0.806