Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilS   Type   Regulator
Locus tag   P3S51_RS01165 Genome accession   NZ_CP121303
Coordinates   240046..241614 (-) Length   522 a.a.
NCBI ID   WP_248102334.1    Uniprot ID   -
Organism   Acinetobacter sp. ANC 7201     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 235046..246614
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P3S51_RS01150 (P3S51_01150) gpmI 235879..237423 (+) 1545 WP_154771934.1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase -
  P3S51_RS01155 (P3S51_01155) - 237445..238617 (+) 1173 WP_154771935.1 S41 family peptidase -
  P3S51_RS01160 (P3S51_01160) pilR 238618..239973 (-) 1356 WP_248102339.1 sigma-54 dependent transcriptional regulator Regulator
  P3S51_RS01165 (P3S51_01165) pilS 240046..241614 (-) 1569 WP_248102334.1 nitrogen regulation protein NR(II) Regulator
  P3S51_RS01170 (P3S51_01170) - 241641..242276 (-) 636 WP_171501186.1 response regulator -
  P3S51_RS01175 (P3S51_01175) - 242494..243552 (+) 1059 WP_171501187.1 serine hydrolase -
  P3S51_RS01180 (P3S51_01180) thrC 243658..244797 (-) 1140 WP_154771939.1 threonine synthase -
  P3S51_RS01185 (P3S51_01185) - 244854..246158 (-) 1305 WP_171501188.1 homoserine dehydrogenase -

Sequence

Protein


Download         Length: 522 a.a.        Molecular weight: 59719.99 Da        Isoelectric Point: 6.8117

>NTDB_id=811732 P3S51_RS01165 WP_248102334.1 240046..241614(-) (pilS) [Acinetobacter sp. ANC 7201]
MYSNYSNSEHNRYRLGLWYGTYRLIIALCLFFVFFLTYQNLQHDYGHPLLYLSSVSIYIFLSLAQLVFYKFYSFHIVRQI
TLFFAIDVILFSALTFASDGPSLHISLLFAIAIFAASLLLEAKKALFITLVAVISVVYQQFLSGLFSLASLNNLSISALL
AILFIVVYIIGQLTIRRFQVLENWSFTQSLEINKLQNINRYILEQIETGYLVLDENCHIALSNPAARELLGISPLYTIDP
FPLYKAQPDLFEILKFDQLKDGEKFEFESQQSNSHIHVKVQKLIVPHQTLTLLVLQDSKRINQHAQQLKLASLGQLSASI
AHEIRNPLATIVQANNLLEGSDDLQQKQLIKMVNKQAQRIDKIIHDTLSMVKNNETHTSTIHLNTFIPAFIQDNLLDIAD
KIQVNIEASSFINFDESQIQQVLINLIRNAIRHNNKDRSHIELNIYSHESYIRLDVIDFGEGISHENIRSLFQPFFSTEI
TGTGLGLYLSHSFCEANQAKLSYVEKQCGACFRIECPRIVIN

Nucleotide


Download         Length: 1569 bp        

>NTDB_id=811732 P3S51_RS01165 WP_248102334.1 240046..241614(-) (pilS) [Acinetobacter sp. ANC 7201]
ATGTATTCTAATTACAGTAATTCTGAGCACAACAGATACAGATTGGGGTTATGGTATGGAACATACCGCCTCATCATTGC
ACTTTGTTTATTCTTCGTTTTCTTTTTGACTTATCAGAACCTACAGCATGACTATGGTCATCCCTTACTGTATTTGTCAT
CTGTTAGCATTTACATTTTTTTAAGCCTTGCACAATTAGTCTTCTATAAATTTTATTCATTTCATATTGTTCGACAAATC
ACATTATTTTTCGCTATAGATGTCATACTTTTTAGCGCACTTACATTTGCTTCAGATGGCCCAAGTCTACATATCAGCTT
ATTATTCGCAATTGCCATCTTTGCCGCATCTTTACTTTTAGAAGCCAAAAAAGCACTATTTATTACACTTGTCGCTGTTA
TTAGTGTCGTGTATCAGCAGTTTTTAAGTGGGCTTTTTTCTCTAGCCTCTCTAAATAATTTGAGTATTAGCGCACTTCTT
GCAATTTTATTTATTGTTGTCTACATTATTGGGCAACTTACGATCCGTCGATTTCAAGTACTTGAAAATTGGAGTTTTAC
TCAATCTTTAGAGATTAACAAACTACAAAATATTAACCGCTATATTCTCGAACAAATTGAAACCGGCTACTTAGTTTTAG
ATGAAAATTGTCATATTGCTCTAAGCAACCCCGCGGCTCGTGAATTACTTGGTATTAGTCCACTCTATACCATTGATCCA
TTTCCACTTTATAAAGCACAACCAGATTTGTTTGAAATTTTAAAATTTGATCAGCTTAAAGATGGCGAAAAATTCGAATT
TGAATCGCAACAAAGTAATTCACATATTCACGTAAAGGTTCAAAAATTAATTGTACCTCACCAAACACTAACTCTCTTAG
TGCTACAAGATTCAAAACGAATCAATCAACATGCACAGCAACTTAAACTTGCATCTCTAGGGCAACTATCTGCAAGTATT
GCCCATGAAATTCGTAATCCTCTTGCAACCATTGTCCAAGCAAATAATCTTCTCGAGGGCAGCGACGATCTTCAACAAAA
GCAACTCATAAAAATGGTGAACAAACAGGCTCAACGGATAGATAAAATTATTCATGACACTTTAAGCATGGTCAAAAACA
ACGAAACACATACTTCAACCATTCATTTAAATACTTTTATACCTGCATTTATTCAAGATAATTTGCTTGATATTGCAGAT
AAAATTCAAGTGAATATAGAAGCATCTTCATTTATTAATTTTGATGAATCACAAATTCAACAAGTGCTTATTAATCTTAT
TCGAAATGCAATACGACACAATAATAAAGACAGAAGCCATATAGAATTAAATATTTATAGCCATGAGAGCTATATCAGAC
TTGATGTAATTGATTTTGGTGAAGGTATTTCGCATGAAAATATTCGCTCGCTATTTCAACCATTTTTTAGTACCGAAATC
ACAGGAACTGGTTTAGGATTATACTTATCGCATAGTTTTTGTGAGGCAAACCAAGCTAAACTGAGTTATGTAGAAAAACA
ATGTGGGGCATGCTTTAGAATTGAATGCCCCCGTATAGTAATAAATTAG

Domains

Predicted by InterproScan.

His Kinase A (phospho-acceptor) domain (HisKA)

(312-373)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(415-516)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilS Acinetobacter baumannii strain A118

55.34

98.659

0.546