Detailed information NTG0081172

Bioinformatically predicted

Overview

• Name: kpsS
• Type: Regulator
• Locus tag: OQH85_RS03925
• Genome accession: NZ_AP026902
• Coordinates: 817031..818236 (-)
• Length: 401 a.a.
• NCBI ID: WP_001161835.1
• Uniprot ID: -
• Organism: Escherichia coli strain MY504
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 812031..823236

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OQH85_RS03905 (MY017_07650)	-	812093..813349 (+)	1257	WP_001259305.1	cytidylyltransferase domain-containing protein	-
OQH85_RS03910 (MY017_07660)	neuC	813346..814521 (+)	1176	WP_000723250.1	UDP-N-acetylglucosamine 2-epimerase	-
OQH85_RS03915 (MY017_07670)	-	814514..815662 (+)	1149	WP_024188362.1	DUF6716 putative glycosyltransferase	-
OQH85_RS03920 (MY017_07680)	-	815652..816881 (+)	1230	WP_000575410.1	alpha-2,8-polysialyltransferase family protein	-
OQH85_RS03925 (MY017_07690)	kpsS	817031..818236 (-)	1206	WP_001161835.1	capsule biosynthesis protein	Regulator
OQH85_RS03930 (MY017_07700)	-	818271..820298 (-)	2028	WP_000579517.1	capsular polysaccharide biosynthesis protein	-
OQH85_RS03935 (MY017_07710)	kdsB	820295..821035 (-)	741	WP_000030745.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
OQH85_RS03940 (MY017_07720)	-	821045..822721 (-)	1677	WP_001298258.1	polysaccharide biosynthesis/export family protein	-

Sequence

Protein

• Length: 401 a.a.
• Molecular weight: 47858.21 Da
• Isoelectric Point: 10.0398

>NTDB_id=81172 OQH85_RS03925 WP_001161835.1 817031..818236(-) (kpsS) [Escherichia coli strain MY504]
MQGNALTVLLSGKKYLLLQGPMGPFFNDVAEWLESLGRNAVNVVFNGGDRFYCRHRQYLAYYQTPKEFPGWLRDLHRQYD
FDTILCFGDCRPLHKEAKRWAKSKGIRFLAFEEGYLRPQFITVEEGGVNAYSSLPRDPDFYRKLPDMPAPHVENLKPSTM
KRIGHAMWYYLMGWHYRHEFPRYRHHKSFSPWYEARCWVRAYWRKQLYKVTQRKVLPRLMNELDQRYYLAVLQVYNDSQI
RNHSNYNDVRDYINEVMYSFSRKAPKESYLVIKHHPMDRGHRLYRPLIKRLSKEYGLGERVIYVHDLPMPELLRHAKAVV
TINSTAGISALIHNKPLKVMGNALYDIKGLTYQGHLHQFWQADFKPDMKLFKKFRGYLLMKTQVNWVYYGGNTTNCQHNI
Y

Nucleotide

• Length: 1206 bp

>NTDB_id=81172 OQH85_RS03925 WP_001161835.1 817031..818236(-) (kpsS) [Escherichia coli strain MY504]
ATGCAAGGTAATGCACTAACCGTTTTATTATCCGGTAAAAAATATCTGCTATTGCAGGGGCCGATGGGACCTTTTTTCAA
TGACGTCGCCGAATGGTTAGAGTCATTAGGACGTAACGCTGTGAATGTTGTATTCAACGGTGGGGATCGTTTTTACTGCC
GCCATCGACAATACCTGGCTTACTACCAAACGCCGAAAGAGTTCCCCGGATGGTTACGGGATCTCCACCGGCAATATGAC
TTTGATACCATCCTCTGCTTTGGTGACTGCCGCCCATTGCACAAAGAAGCAAAACGTTGGGCAAAGTCGAAAGGGATCCG
CTTTCTGGCATTTGAAGAAGGATATTTACGTCCGCAGTTTATTACTGTTGAAGAAGGCGGAGTGAACGCATATTCATCGC
TACCGCGCGATCCGGATTTTTATCGTAAGTTACCAGATATGCCTGCGCCGCACGTTGAGAACTTAAAACCTTCAACGATG
AAACGTATAGGTCATGCGATGTGGTATTACCTGATGGGTTGGCATTACCGTCATGAGTTCCCTCGCTACCGCCACCACAA
ATCGTTTTCCCCCTGGTATGAGGCTCGTTGCTGGGTTCGTGCATACTGGCGCAAGCAACTTTACAAGGTAACACAGCGTA
AGGTATTGCCGAGGTTAATGAACGAGCTGGACCAGCGTTATTATCTTGCCGTTTTGCAGGTGTATAACGATAGCCAGATT
CGTAACCACAGCAATTATAACGATGTGCGTGACTATATTAATGAAGTCATGTACTCATTTTCACGTAAAGCACCGAAAGA
AAGTTATTTGGTGATCAAGCACCATCCAATGGATCGTGGTCACAGACTCTATCGACCATTAATTAAGCGGCTAAGTAAGG
AATATGGCTTAGGTGAGCGCGTCATTTATGTGCACGATCTCCCGATGCCGGAACTATTACGCCACGCAAAAGCGGTGGTG
ACGATTAACAGTACGGCGGGGATCTCTGCACTGATTCATAACAAACCACTCAAAGTGATGGGCAATGCCCTGTACGACAT
CAAGGGCTTGACGTATCAAGGGCATTTGCACCAGTTCTGGCAGGCCGATTTTAAACCGGATATGAAACTGTTTAAGAAGT
TTCGGGGGTATTTATTGATGAAGACGCAGGTTAATTGGGTTTATTATGGGGGGAACACAACAAACTGCCAACATAATATA
TATTAA

Domains

Predicted by InterProScan.

• Capsule polysaccharide biosynthesis protein (Capsule_synth) (83-389)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
kpsS	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	39.846	97.007	0.387