Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   P9J39_RS07785 Genome accession   NZ_CP121269
Coordinates   1671778..1672404 (+) Length   208 a.a.
NCBI ID   WP_017384804.1    Uniprot ID   A0AA37AJW2
Organism   Enterobacter hormaechei subsp. xiangfangensis strain F81Y     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1666778..1677404
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P9J39_RS07765 (P9J39_07765) - 1667177..1668937 (-) 1761 WP_278109575.1 Lon protease family protein -
  P9J39_RS07770 (P9J39_07770) matP 1669124..1669576 (+) 453 WP_006809347.1 macrodomain Ter protein MatP -
  P9J39_RS07775 (P9J39_07775) ompA 1669642..1670694 (-) 1053 WP_017694761.1 porin OmpA -
  P9J39_RS07780 (P9J39_07780) sulA 1671051..1671560 (-) 510 WP_032104231.1 SOS-induced cell division inhibitor SulA -
  P9J39_RS07785 (P9J39_07785) sxy/tfoX 1671778..1672404 (+) 627 WP_017384804.1 TfoX/Sxy family DNA transformation protein Regulator
  P9J39_RS07790 (P9J39_07790) yccS 1672361..1674523 (-) 2163 WP_015570895.1 YccS family putative transporter -
  P9J39_RS07795 (P9J39_07795) - 1674542..1674988 (-) 447 WP_003858149.1 YccF domain-containing protein -
  P9J39_RS07800 (P9J39_07800) helD 1675111..1677165 (+) 2055 WP_047731346.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24018.63 Da        Isoelectric Point: 9.4592

>NTDB_id=811559 P9J39_RS07785 WP_017384804.1 1671778..1672404(+) (sxy/tfoX) [Enterobacter hormaechei subsp. xiangfangensis strain F81Y]
MKKISYDRIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELMEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=811559 P9J39_RS07785 WP_017384804.1 1671778..1672404(+) (sxy/tfoX) [Enterobacter hormaechei subsp. xiangfangensis strain F81Y]
ATGAAAAAGATATCTTATGATCGGATTTATCAATCTCAGGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGCGAGCTGTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCCTCCTCTTTTCTGACCCTGATGAAACGAGGACGGCCAGTGCTACTTAAT
TACTACCGTGTGGATGAAGGTCTGTGGCAAAACAGGGAAAAGCTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAATCGGCTTAAGGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCTAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCCATCGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTATGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572