Detailed information NTG0811512

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: RS166_RS27605
• Genome accession: NZ_CP135671
• Coordinates: 5470207..5471232 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain TUM9803
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 5465207..5476232

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RS166_RS27585 (RS166_27585)	metJ	5466268..5466585 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
RS166_RS27590 (RS166_27590)	yiiX	5466769..5467377 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
RS166_RS27595 (RS166_27595)	rpmE	5467438..5467650 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
RS166_RS27600 (RS166_27600)	priA	5467853..5470051 (+)	2199	WP_001355569.1	primosomal protein N'	Machinery gene
RS166_RS27605 (RS166_27605)	cytR	5470207..5471232 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
RS166_RS27610 (RS166_27610)	ftsN	5471324..5472283 (+)	960	WP_000068828.1	cell division protein FtsN	-
RS166_RS27615 (RS166_27615)	hslV	5472376..5472906 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
RS166_RS27620 (RS166_27620)	hslU	5472916..5474247 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
RS166_RS27625 (RS166_27625)	menA	5474314..5475240 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
RS166_RS27630 (RS166_27630)	rraA	5475333..5475818 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
RS166_RS27635 (RS166_27635)	zapB	5475903..5476148 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=811512 RS166_RS27605 WP_000644904.1 5470207..5471232(+) (cytR) [Escherichia coli strain TUM9803]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=811512 RS166_RS27605 WP_000644904.1 5470207..5471232(+) (cytR) [Escherichia coli strain TUM9803]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628