Detailed information NTG0811495

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: P8R49_RS06220
• Genome accession: NZ_CP121266
• Coordinates: 1196526..1197479 (+)
• Length: 317 a.a.
• NCBI ID: WP_014479436.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain 107105
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1191526..1202479

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P8R49_RS06190 (P8R49_06190)	argF	1192068..1193027 (+)	960	WP_014479432.1	ornithine carbamoyltransferase	-
P8R49_RS06200 (P8R49_06200)	yjzC	1194403..1194582 (+)	180	WP_003245356.1	YjzC family protein	-
P8R49_RS06205 (P8R49_06205)	yjzD	1194628..1194813 (-)	186	WP_003245236.1	DUF2929 domain-containing protein	-
P8R49_RS06210 (P8R49_06210)	-	1195062..1195796 (+)	735	WP_014479433.1	hypothetical protein	-
P8R49_RS06215 (P8R49_06215)	-	1195878..1196435 (+)	558	WP_014479435.1	hypothetical protein	-
P8R49_RS06220 (P8R49_06220)	med	1196526..1197479 (+)	954	WP_014479436.1	transcriptional regulator Med	Regulator
P8R49_RS06225 (P8R49_06225)	comZ	1197494..1197685 (+)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
P8R49_RS06230 (P8R49_06230)	yjzB	1197715..1197942 (-)	228	WP_031600361.1	spore coat protein YjzB	-
P8R49_RS06235 (P8R49_06235)	fabH	1198107..1199045 (+)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
P8R49_RS06240 (P8R49_06240)	fabF	1199068..1200309 (+)	1242	WP_014479438.1	beta-ketoacyl-ACP synthase II	-
P8R49_RS06245 (P8R49_06245)	yjaZ	1200385..1201170 (+)	786	WP_014479439.1	DUF2268 domain-containing protein	-
P8R49_RS06250 (P8R49_06250)	appD	1201362..1202348 (+)	987	WP_003232965.1	oligopeptide ABC transporter ATP-binding protein AppD	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35310.88 Da
• Isoelectric Point: 4.6652

>NTDB_id=811495 P8R49_RS06220 WP_014479436.1 1196526..1197479(+) (med) [Bacillus subtilis strain 107105]
MITRLVMIFSVLLLLSGCGKTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=811495 P8R49_RS06220 WP_014479436.1 1196526..1197479(+) (med) [Bacillus subtilis strain 107105]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGAAAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTGGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTCCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGACA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	99.369	100	0.994