Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   P8632_RS01520 Genome accession   NZ_CP121263
Coordinates   315659..316324 (+) Length   221 a.a.
NCBI ID   WP_002488207.1    Uniprot ID   -
Organism   Staphylococcus hominis strain FSEL1     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 310659..321324
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P8632_RS01495 (P8632_01485) - 311238..312170 (+) 933 WP_326515056.1 LCP family protein -
  P8632_RS01500 (P8632_01490) - 312228..313151 (-) 924 WP_326515057.1 NAD-dependent epimerase/dehydratase family protein -
  P8632_RS01505 (P8632_01495) - 313286..314755 (-) 1470 WP_326515058.1 alkaline phosphatase -
  P8632_RS01510 (P8632_01500) - 315136..315309 (+) 174 WP_186364008.1 hypothetical protein -
  P8632_RS01515 (P8632_01505) - 315479..315646 (+) 168 WP_177236454.1 hypothetical protein -
  P8632_RS01520 (P8632_01510) braR 315659..316324 (+) 666 WP_002488207.1 response regulator transcription factor Regulator
  P8632_RS01525 (P8632_01515) - 316330..317225 (+) 896 Protein_298 sensor histidine kinase -
  P8632_RS01530 (P8632_01520) - 317357..318106 (+) 750 WP_002449305.1 ABC transporter ATP-binding protein -
  P8632_RS01535 (P8632_01525) - 318108..320057 (+) 1950 WP_133944956.1 FtsX-like permease family protein -
  P8632_RS01540 (P8632_01530) - 320145..320909 (+) 765 WP_002449398.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25398.17 Da        Isoelectric Point: 4.6475

>NTDB_id=811446 P8632_RS01520 WP_002488207.1 315659..316324(+) (braR) [Staphylococcus hominis strain FSEL1]
MKVLIVEDDVVIAESLGNELSHWNYEVSIAKQFGNILEEFKTAEPELVLLDINLPTFNGYHWCQEIRKVSNVPIIFISSR
TDNMDQIMAIQMGGDDFIEKPFNLSLTIAKIQALLRRTYDLTVSNNEMTVKGCKLVVDEATLYYNNDSVQLSFTELQILN
KLFQNEGKYVNRTAIIEKCWESENFIDDNTLAVNMTRLRKKLQSIGIVDFIETKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=811446 P8632_RS01520 WP_002488207.1 315659..316324(+) (braR) [Staphylococcus hominis strain FSEL1]
ATGAAAGTATTAATTGTCGAAGATGATGTCGTCATTGCAGAAAGTCTAGGGAATGAACTCTCACATTGGAACTATGAAGT
GAGTATTGCTAAGCAGTTTGGTAATATTCTTGAAGAATTTAAAACTGCAGAACCTGAACTTGTGCTATTAGATATTAATT
TACCTACATTTAATGGTTATCATTGGTGCCAAGAGATACGTAAAGTATCTAATGTCCCAATTATTTTCATTAGTTCGCGT
ACTGACAATATGGATCAAATTATGGCAATTCAAATGGGGGGAGATGACTTTATTGAAAAGCCATTTAATTTGTCACTTAC
TATAGCGAAAATTCAAGCATTGCTACGTAGAACATATGATTTAACGGTTTCAAATAATGAGATGACTGTTAAAGGGTGTA
AACTCGTTGTTGATGAAGCCACACTATACTACAACAATGACTCTGTACAACTTTCGTTTACTGAACTACAAATTTTGAAT
AAATTATTTCAAAATGAAGGGAAATATGTCAATCGTACAGCAATTATTGAAAAATGTTGGGAATCAGAGAATTTTATTGA
TGATAATACGTTAGCAGTAAATATGACACGCCTACGTAAAAAGCTGCAATCTATCGGTATTGTTGATTTCATTGAGACAA
AGAAAAATGTAGGATATAAGGTGTAA

Domains

Predicted by InterproScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

76.923

100

0.769