Detailed information NTG0811176

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: D1Y77_RS04295
• Genome accession: NZ_CP121210
• Coordinates: 924230..925333 (-)
• Length: 367 a.a.
• NCBI ID: WP_154469316.1
• Uniprot ID: A0AAP6HG83
• Organism: Riemerella anatipestifer strain RCAD0421
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 919230..930333

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D1Y77_RS04270 (D1Y77_004270)	comF	920428..921081 (-)	654	WP_004918078.1	phosphoribosyltransferase family protein	Machinery gene
D1Y77_RS04280 (D1Y77_004280)	-	921303..921854 (-)	552	WP_004918080.1	hypothetical protein	-
D1Y77_RS04285 (D1Y77_004285)	-	921906..922556 (-)	651	WP_154469317.1	HD domain-containing protein	-
D1Y77_RS04290 (D1Y77_004290)	gdhA	922688..924046 (-)	1359	WP_049334426.1	NADP-specific glutamate dehydrogenase	-
D1Y77_RS04295 (D1Y77_004295)	dprA	924230..925333 (-)	1104	WP_154469316.1	DNA-processing protein DprA	Machinery gene
D1Y77_RS04300 (D1Y77_004300)	-	925336..925713 (-)	378	WP_154469315.1	group III truncated hemoglobin	-
D1Y77_RS04305 (D1Y77_004305)	ruvC	925724..926278 (-)	555	WP_161398733.1	crossover junction endodeoxyribonuclease RuvC	-
D1Y77_RS04310 (D1Y77_004310)	-	926336..926809 (-)	474	WP_154469314.1	Lrp/AsnC family transcriptional regulator	-
D1Y77_RS04315 (D1Y77_004315)	-	927155..930082 (+)	2928	WP_154469313.1	SusC/RagA family TonB-linked outer membrane protein	-

Sequence

Protein

• Length: 367 a.a.
• Molecular weight: 40407.34 Da
• Isoelectric Point: 6.3958

>NTDB_id=811176 D1Y77_RS04295 WP_154469316.1 924230..925333(-) (dprA) [Riemerella anatipestifer strain RCAD0421]
MVNAEEILYSIALRRSPLVGDVTFANLVGEVGSAKEVWSLSQSELRKISGIGKQIASGIGDESLLKFAEREVEFCIKNEI
KINLRHLNQLPRLLGECYDAPAILFQKGDYDDIANNISIVGTRNATAYGKSFLEDLIVQFKNKNIQVISGLALGTDGIAH
QEALKNNIKTSAVLAHGLHIIYPSKHKILAEEILNNGGALFSEFCSDEKPDREHFLQRNRIVAGLSANTIVVESAYAGGS
ISTASFANQYNREVYALAGRLTDKYSQGCNHLIFQNKAKIISSIKGLLKDLDLDNTSKVLELFPSVEVSLTPIQKPIYDI
IKEVNDISLDDLSEKLNQPISKVLPVLLELELLGLIRANSGRRYSIV

Nucleotide

• Length: 1104 bp

>NTDB_id=811176 D1Y77_RS04295 WP_154469316.1 924230..925333(-) (dprA) [Riemerella anatipestifer strain RCAD0421]
ATGGTAAATGCAGAAGAAATTTTATATTCTATTGCTTTACGGCGAAGCCCTTTGGTAGGAGATGTTACATTTGCAAATTT
AGTGGGCGAAGTTGGTTCTGCTAAGGAGGTTTGGAGTTTGTCTCAATCGGAGTTAAGAAAAATATCAGGCATAGGTAAAC
AAATTGCCTCAGGTATTGGTGATGAAAGCCTTTTGAAATTTGCCGAAAGGGAAGTTGAGTTCTGCATTAAAAACGAGATA
AAAATCAATCTAAGACATCTTAATCAGCTTCCTCGTCTTTTAGGTGAATGTTATGATGCTCCAGCTATTCTTTTTCAAAA
AGGAGATTATGACGATATTGCTAATAATATTAGCATTGTTGGGACGAGAAATGCCACTGCTTATGGTAAGTCGTTTTTGG
AGGATTTAATTGTTCAGTTTAAAAATAAAAATATTCAAGTCATTAGTGGTTTAGCTTTAGGTACAGACGGAATAGCTCAT
CAAGAGGCTTTAAAAAACAATATAAAAACTTCAGCGGTTTTAGCACACGGTTTACATATCATTTATCCGTCCAAACATAA
AATTCTCGCTGAAGAAATATTAAATAATGGTGGAGCTTTGTTTTCTGAATTCTGCTCTGATGAAAAACCAGATAGAGAAC
ATTTTTTGCAAAGAAATCGTATTGTGGCAGGGCTTTCGGCTAATACGATTGTGGTAGAGTCTGCTTATGCAGGAGGTTCT
ATTAGTACGGCGAGTTTTGCTAATCAGTATAATAGAGAGGTGTACGCTTTGGCAGGGCGTCTTACGGATAAGTACAGCCA
AGGTTGCAATCATCTTATTTTTCAAAATAAAGCTAAAATCATATCTTCTATTAAAGGTTTGCTAAAAGACCTAGATTTGG
ATAATACTTCTAAAGTTTTGGAGCTTTTTCCTTCGGTTGAGGTTTCTTTAACTCCTATTCAGAAGCCTATTTATGATATT
ATTAAAGAGGTTAATGATATTTCTTTGGACGACTTGTCAGAAAAGTTAAATCAACCTATTTCTAAAGTGCTTCCAGTTTT
GTTAGAATTAGAATTATTGGGATTGATAAGGGCAAATTCTGGGAGGAGATATTCTATTGTTTAG

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (77-281)

• DprA winged helix domain (DprA_WH) (309-361)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Riemerella anatipestifer ATCC 11845 = DSM 15868	94.278	100	0.943