Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   P7Y79_RS06885 Genome accession   NZ_CP121207
Coordinates   1433445..1434530 (-) Length   361 a.a.
NCBI ID   WP_278007342.1    Uniprot ID   -
Organism   Streptococcus ruminicola strain CNU_77-47     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1428445..1439530
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P7Y79_RS06860 (P7Y79_06860) - 1429408..1429914 (-) 507 WP_278007339.1 VanZ family protein -
  P7Y79_RS06865 (P7Y79_06865) rlmN 1429924..1431024 (-) 1101 WP_074626091.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  P7Y79_RS06870 (P7Y79_06870) - 1431045..1431605 (-) 561 WP_278007340.1 YutD family protein -
  P7Y79_RS06875 (P7Y79_06875) - 1431635..1432963 (-) 1329 WP_278007341.1 bifunctional metallophosphatase/5'-nucleotidase -
  P7Y79_RS06880 (P7Y79_06880) - 1433066..1433314 (-) 249 WP_158913275.1 DUF3923 family protein -
  P7Y79_RS06885 (P7Y79_06885) sepM 1433445..1434530 (-) 1086 WP_278007342.1 SepM family pheromone-processing serine protease Regulator
  P7Y79_RS06890 (P7Y79_06890) coaD 1434508..1435005 (-) 498 WP_278007343.1 pantetheine-phosphate adenylyltransferase -
  P7Y79_RS06895 (P7Y79_06895) rsmD 1435037..1435576 (-) 540 WP_278007344.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  P7Y79_RS06900 (P7Y79_06900) - 1435724..1436554 (+) 831 WP_278007845.1 hypothetical protein -
  P7Y79_RS06905 (P7Y79_06905) asnA 1436656..1437648 (-) 993 WP_074563225.1 aspartate--ammonia ligase -
  P7Y79_RS06910 (P7Y79_06910) - 1437992..1439200 (-) 1209 WP_278007345.1 MFS transporter -

Sequence


Protein


Download         Length: 361 a.a.        Molecular weight: 39259.45 Da        Isoelectric Point: 5.0954

>NTDB_id=811111 P7Y79_RS06885 WP_278007342.1 1433445..1434530(-) (sepM) [Streptococcus ruminicola strain CNU_77-47]
MTILNAFKGILKKLGRILYRFKWWILGVVGTVFFIFSLFYPLDYYVEMPGGAYDVRSVLTVNNKTDKDEGSYNFVAVTVS
QATLAQLVYAWLTPHTEISTAAATTGGYSNEDYMRINQYYMETSQNTATYQALTLAGKDVKLDYQGVYVLNVTKNSTFKG
LLHLADTVTGVNGKTFKSSQELMAYVADLDLGSKVTVQEISNGKTKEVSGKIIELPNGKNGIGIGLVDHTKVSSDVDVTF
DTSGVGGPSAGLMFTLDIYDQVNNEDLRKGRKIAGTGTIESDGSVGDIGGAGLKVVSAAKSGADIFFVPNNPVDKETLKK
DPDAKTNYEEAKEAAKDLDTDMKIVPVKNVQEAIDYLRSTN

Nucleotide


Download         Length: 1086 bp        

>NTDB_id=811111 P7Y79_RS06885 WP_278007342.1 1433445..1434530(-) (sepM) [Streptococcus ruminicola strain CNU_77-47]
ATGACAATTTTAAACGCATTTAAAGGGATTTTGAAAAAGTTAGGTCGTATTTTATACCGCTTTAAATGGTGGATACTAGG
AGTAGTGGGAACTGTATTTTTCATCTTTAGTTTATTTTATCCCCTCGACTATTATGTTGAAATGCCTGGGGGTGCTTATG
ATGTTCGTAGTGTTTTAACCGTTAATAACAAAACAGATAAAGACGAAGGTTCCTATAACTTTGTAGCGGTGACGGTGAGC
CAAGCGACGCTTGCTCAGCTGGTTTATGCTTGGTTAACACCGCATACGGAGATTTCAACGGCTGCCGCAACAACAGGTGG
CTACAGTAATGAAGATTACATGCGTATTAATCAATACTACATGGAAACTTCACAAAATACAGCGACCTACCAAGCTTTAA
CCCTAGCAGGGAAAGACGTTAAGCTTGATTATCAAGGTGTCTATGTCCTAAATGTAACCAAAAATTCAACCTTTAAAGGA
CTTTTACATCTAGCTGATACGGTTACTGGTGTAAATGGTAAAACGTTCAAGAGTTCACAAGAATTGATGGCTTATGTAGC
AGACTTGGATCTTGGCTCTAAAGTCACTGTTCAAGAAATTTCAAACGGTAAAACTAAAGAAGTTTCTGGTAAAATCATTG
AATTGCCAAATGGTAAAAATGGTATCGGTATTGGTTTAGTCGATCATACCAAGGTGTCATCTGATGTCGATGTGACTTTT
GATACCAGTGGTGTTGGTGGACCTAGTGCAGGCTTGATGTTCACCCTTGATATTTATGATCAAGTTAATAACGAAGATCT
TCGTAAAGGTCGTAAAATTGCTGGTACTGGTACCATTGAATCAGATGGTTCTGTTGGTGATATCGGCGGAGCAGGCTTAA
AAGTTGTCTCAGCTGCCAAATCTGGTGCAGATATTTTCTTTGTTCCAAATAATCCAGTCGATAAAGAAACATTGAAAAAA
GATCCTGATGCTAAGACAAATTACGAAGAAGCCAAAGAAGCTGCTAAAGACCTTGATACAGACATGAAAATTGTCCCTGT
CAAGAATGTCCAAGAAGCGATTGATTACCTAAGAAGTACAAATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

67.847

93.906

0.637