Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   P7F70_RS09570 Genome accession   NZ_CP121201
Coordinates   1909749..1910465 (+) Length   238 a.a.
NCBI ID   WP_278024224.1    Uniprot ID   -
Organism   Streptococcus pluranimalium strain SP28     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1904749..1915465
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P7F70_RS09555 (P7F70_09560) - 1904823..1905560 (+) 738 WP_278024221.1 GntR family transcriptional regulator -
  P7F70_RS09560 (P7F70_09565) treC 1905737..1907362 (-) 1626 WP_278024222.1 alpha,alpha-phosphotrehalase -
  P7F70_RS09565 (P7F70_09570) treP 1907509..1909548 (-) 2040 WP_278024223.1 PTS system trehalose-specific EIIBC component -
  P7F70_RS09570 (P7F70_09575) treR 1909749..1910465 (+) 717 WP_278024224.1 trehalose operon repressor Regulator
  P7F70_RS09575 (P7F70_09580) - 1910500..1911657 (-) 1158 WP_278024225.1 glycerate kinase -
  P7F70_RS09580 (P7F70_09585) - 1911837..1913476 (+) 1640 Protein_1828 phosphoenolpyruvate carboxykinase (ATP) -
  P7F70_RS09585 (P7F70_09590) - 1913604..1914248 (-) 645 WP_278024226.1 glutamate racemase -
  P7F70_RS09590 (P7F70_09595) - 1914253..1914582 (-) 330 WP_278024227.1 hypothetical protein -
  P7F70_RS09595 (P7F70_09600) dtd 1914588..1915031 (-) 444 WP_278024228.1 D-aminoacyl-tRNA deacylase -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27262.18 Da        Isoelectric Point: 6.9270

>NTDB_id=811019 P7F70_RS09570 WP_278024224.1 1909749..1910465(+) (treR) [Streptococcus pluranimalium strain SP28]
MKKYEKVFRNLETAINQGIYQVNDYLPTEEELAKEYAVSRDTIRKALKLLAEHGLIQKRQGSGSQIIKHERINFPVSALT
SFQEIAQAQGMATTTNVIAIDKLIVDGTMSELTGFPPKSHVWRITRQRVMEGVASVLDIDYLLTTFVPEIDRSIAEKSIY
DYLENHLHLMIDLAEKEITIDQTNQQDSILLDLAGEHHVVSIKSKVFLANGQQFQFTESRHKLDKFRFVDFAKRRPAN

Nucleotide


Download         Length: 717 bp        

>NTDB_id=811019 P7F70_RS09570 WP_278024224.1 1909749..1910465(+) (treR) [Streptococcus pluranimalium strain SP28]
ATGAAAAAGTATGAGAAAGTTTTCCGAAATTTAGAGACTGCTATTAACCAAGGGATCTACCAAGTTAACGACTATTTACC
AACCGAAGAAGAGTTGGCTAAAGAGTATGCTGTCAGCCGAGATACCATTCGAAAAGCCTTAAAGCTCCTGGCAGAACACG
GACTTATTCAAAAACGTCAAGGTAGTGGCTCACAGATCATCAAGCATGAGCGCATTAACTTTCCTGTTTCAGCTCTTACC
AGCTTTCAGGAAATCGCCCAAGCGCAAGGGATGGCAACGACAACTAATGTCATCGCTATCGACAAACTCATTGTTGATGG
GACGATGTCAGAACTAACTGGTTTCCCACCCAAGAGTCATGTCTGGCGTATCACGCGACAACGCGTGATGGAAGGGGTAG
CATCTGTCCTTGATATTGACTACTTGTTGACGACTTTTGTTCCCGAAATCGATCGTTCCATTGCGGAGAAATCCATTTAT
GATTATTTGGAAAACCACCTGCACCTCATGATTGATCTAGCTGAAAAAGAAATCACCATCGACCAGACCAATCAACAAGA
CAGTATTCTTCTGGACTTAGCAGGTGAGCATCATGTTGTTTCCATTAAGTCCAAAGTCTTTCTAGCCAACGGCCAACAAT
TCCAATTCACCGAAAGCCGGCACAAATTGGATAAATTTAGATTTGTAGATTTTGCTAAGAGAAGACCTGCAAATTAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-65)

UTRA domain (UTRA)

(88-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

64.957

98.319

0.639