Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   P7F70_RS07145 Genome accession   NZ_CP121201
Coordinates   1425160..1425969 (-) Length   269 a.a.
NCBI ID   WP_115130594.1    Uniprot ID   A0A345VLE4
Organism   Streptococcus pluranimalium strain SP28     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1420160..1430969
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P7F70_RS07135 (P7F70_07140) smc 1420678..1424223 (-) 3546 WP_278023880.1 chromosome segregation protein SMC -
  P7F70_RS07140 (P7F70_07145) rnc 1424225..1424926 (-) 702 WP_104968252.1 ribonuclease III -
  P7F70_RS07145 (P7F70_07150) vicX 1425160..1425969 (-) 810 WP_115130594.1 MBL fold metallo-hydrolase Regulator
  P7F70_RS07150 (P7F70_07155) vicK 1425971..1427317 (-) 1347 WP_104968254.1 cell wall metabolism sensor histidine kinase VicK Regulator
  P7F70_RS07155 (P7F70_07160) vicR 1427310..1428017 (-) 708 WP_104968255.1 response regulator YycF Regulator
  P7F70_RS07160 (P7F70_07165) - 1428256..1429041 (+) 786 WP_278023883.1 amino acid ABC transporter ATP-binding protein -
  P7F70_RS07165 (P7F70_07170) - 1429052..1429879 (+) 828 WP_278023885.1 transporter substrate-binding domain-containing protein -
  P7F70_RS07170 (P7F70_07175) - 1429898..1430593 (+) 696 WP_278023887.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30174.32 Da        Isoelectric Point: 6.1222

>NTDB_id=811003 P7F70_RS07145 WP_115130594.1 1425160..1425969(-) (vicX) [Streptococcus pluranimalium strain SP28]
MADKGFKYSILASGSTGNAFYLETPKKRLLIDAGLTGKKITSLLAEIDRRPEDLDAILITHEHSDHIKGVGVLARKYNLD
LYANEKTWEVMDAKNMLGKIDHSQKHIFSREKMMTFGDIDIESFGVSHDAVDPQFYRFMKDDKSFVMLTDTGYVSDRMAG
IVANADGYLIESNHDIEILRAGSYPWKTKQRILSDFGHLSNEAGAQAMIDTLGNRTKKIYLGHLSKENNIKELAHMTMES
NLMQADLGVNHDFKVLDTSPDTATPLVDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=811003 P7F70_RS07145 WP_115130594.1 1425160..1425969(-) (vicX) [Streptococcus pluranimalium strain SP28]
GTGGCCGATAAAGGATTTAAATACAGTATTTTAGCTTCAGGGTCGACAGGTAATGCTTTTTATCTGGAGACACCAAAGAA
ACGTCTTTTGATTGATGCTGGATTGACTGGTAAGAAAATTACCAGTCTTTTAGCTGAAATTGATCGACGACCTGAGGATT
TAGATGCTATTTTGATTACACACGAGCATTCAGACCATATCAAAGGAGTTGGGGTTTTGGCTCGCAAGTACAATCTTGAC
TTGTATGCGAATGAAAAAACCTGGGAAGTTATGGATGCCAAAAATATGCTAGGTAAGATAGATCATTCACAGAAGCATAT
CTTTTCGCGCGAAAAAATGATGACTTTCGGAGATATTGATATTGAGTCTTTTGGCGTTAGTCATGATGCGGTAGATCCGC
AGTTTTATCGTTTTATGAAAGATGATAAAAGCTTTGTCATGTTAACTGACACGGGCTATGTTAGCGATCGTATGGCAGGG
ATTGTTGCCAATGCAGATGGCTATCTGATTGAATCTAACCATGATATTGAAATTCTCAGAGCGGGTTCCTATCCATGGAA
GACCAAACAAAGGATTTTATCTGACTTTGGACATTTGTCCAATGAGGCTGGTGCTCAGGCTATGATTGACACGCTTGGTA
ATCGTACTAAGAAGATTTATCTTGGGCATTTGAGTAAGGAAAACAATATCAAGGAGCTAGCTCATATGACAATGGAGTCA
AATCTGATGCAAGCTGACTTGGGTGTTAATCATGATTTCAAAGTATTGGATACCTCACCAGACACGGCGACGCCATTAGT
CGATATTTAA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-215)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A345VLE4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.093

100

0.751