Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   P7F70_RS02910 Genome accession   NZ_CP121201
Coordinates   557245..559041 (+) Length   598 a.a.
NCBI ID   WP_278025072.1    Uniprot ID   -
Organism   Streptococcus pluranimalium strain SP28     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 552245..564041
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P7F70_RS02885 (P7F70_02885) queA 552485..553531 (-) 1047 WP_278025067.1 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA -
  P7F70_RS02890 (P7F70_02890) - 553701..554405 (+) 705 WP_278025068.1 glucosamine-6-phosphate deaminase -
  P7F70_RS02895 (P7F70_02895) - 554452..555408 (-) 957 WP_278025069.1 glutathione S-transferase family protein -
  P7F70_RS02900 (P7F70_02900) - 555512..556225 (+) 714 WP_278025070.1 pseudouridine synthase -
  P7F70_RS02905 (P7F70_02905) - 556286..557248 (+) 963 WP_278025071.1 competence protein CoiA family protein -
  P7F70_RS02910 (P7F70_02910) pepF 557245..559041 (+) 1797 WP_278025072.1 oligoendopeptidase F Regulator
  P7F70_RS02915 (P7F70_02915) - 559069..559491 (+) 423 WP_218654149.1 hypothetical protein -
  P7F70_RS02920 (P7F70_02920) - 559694..560239 (+) 546 WP_278025073.1 GNAT family N-acetyltransferase -
  P7F70_RS02925 (P7F70_02925) - 560236..560850 (+) 615 WP_278025074.1 HAD-IA family hydrolase -
  P7F70_RS02930 (P7F70_02930) - 561115..561333 (-) 219 WP_160543773.1 hypothetical protein -
  P7F70_RS02935 (P7F70_02935) - 561549..562256 (+) 708 WP_218654394.1 O-methyltransferase -
  P7F70_RS02940 (P7F70_02940) - 562355..563281 (+) 927 WP_278025075.1 peptidyl-prolyl cis-trans isomerase -
  P7F70_RS02945 (P7F70_02945) - 563434..564030 (+) 597 WP_278025076.1 LURP-one-related family protein -

Sequence

Protein


Download         Length: 598 a.a.        Molecular weight: 68587.24 Da        Isoelectric Point: 4.4808

>NTDB_id=810990 P7F70_RS02910 WP_278025072.1 557245..559041(+) (pepF) [Streptococcus pluranimalium strain SP28]
MTDNRSHLKEEETWDLSTIFETDQAWEVERQALENDLKASQNDAGHLLDSAKSLLDITENALALMRRLETLYVYASMKND
QDTTIAVYQEMEAKATALSSLYSQTFAFYEPEFLAITKEQLENYKGEEPGLLAYGHYFEKLLAAKDHVLSQEAEELLAGA
SEIFGSAAETFSIFDNADVTYPWVTNDEGELVELTHGNFISLMESKNREVRKGAYEAYYGVYEQFQHTYAKTLQTNVKVH
NYKAKVRGYESARQAALSANFIPESAYDTLLAVVNKHLPLLHRYMKLRQELLGLDDLKMYDVYTPLSEHDMAITYLEALE
KSRQVLTVFGKDYSDRVDRAFSERWIDVHVNKGKRSGAYSGGSYDTNAFMLLNWQDTLDNLYTLIHETGHSLHSTFTREN
QPYVYGDYSIFLAEIASTTNENILTETLLEEVTDDKERFAILNHYLDGFKGTIFRQTQFAEFELAIHQADQAGQVLTSNF
LNKTYADLNEKYYGLSAEDNHEIQFEWARIPHFYYNFYVYQYATGFAAASYLADRIVHGTDKDRDNYLDYLKAGNSDYPL
NVIAKAGVDMTSADYLEGAFKVFEERLEELENLVAKLS

Nucleotide


Download         Length: 1797 bp        

>NTDB_id=810990 P7F70_RS02910 WP_278025072.1 557245..559041(+) (pepF) [Streptococcus pluranimalium strain SP28]
ATGACAGATAACCGTAGCCATCTGAAGGAAGAAGAAACTTGGGATTTAAGCACTATTTTTGAGACAGATCAAGCTTGGGA
AGTGGAACGTCAAGCCTTAGAAAACGATTTGAAAGCTTCTCAAAATGATGCGGGGCACCTTTTGGATTCAGCTAAAAGCT
TATTGGATATTACGGAAAATGCTTTAGCTTTGATGCGTCGTTTAGAGACATTATACGTCTATGCTTCCATGAAAAATGAC
CAGGATACGACAATCGCAGTTTATCAAGAGATGGAAGCCAAGGCGACGGCCTTATCATCTCTTTATAGTCAGACCTTTGC
CTTTTATGAGCCAGAATTTTTGGCTATCACTAAAGAACAGTTGGAAAACTATAAAGGTGAAGAGCCGGGCCTTCTTGCTT
ATGGCCATTATTTTGAAAAATTGTTGGCAGCTAAAGACCATGTATTGTCCCAAGAAGCAGAAGAATTACTAGCTGGTGCC
TCTGAAATTTTTGGCTCAGCAGCTGAAACCTTCTCCATTTTTGATAATGCTGATGTCACCTATCCTTGGGTAACCAATGA
TGAAGGAGAATTGGTCGAATTAACCCATGGTAACTTTATCAGCCTTATGGAATCTAAAAATCGTGAGGTTCGTAAGGGTG
CCTATGAAGCCTATTATGGTGTTTATGAGCAGTTTCAGCATACTTATGCTAAAACCCTTCAAACCAACGTTAAGGTACAT
AATTACAAGGCTAAAGTGCGTGGCTATGAGTCTGCTCGCCAAGCTGCTCTTTCAGCAAACTTTATTCCTGAGTCTGCCTA
TGACACTTTGTTAGCTGTTGTCAATAAGCATTTACCGCTTCTTCATCGCTATATGAAACTTCGTCAGGAGCTATTAGGAC
TGGATGACCTCAAAATGTACGATGTCTATACGCCACTGTCAGAGCATGATATGGCGATTACTTATCTGGAAGCTCTTGAA
AAGTCACGTCAAGTGTTAACGGTATTTGGTAAAGATTATAGCGACCGCGTTGACCGTGCTTTCTCAGAGCGTTGGATTGA
TGTACATGTTAATAAAGGGAAACGTTCGGGTGCCTATTCAGGCGGTTCTTACGATACCAATGCTTTTATGTTGCTCAACT
GGCAAGATACTTTAGACAATCTTTATACCCTTATTCATGAAACAGGCCATAGTCTGCATTCGACCTTTACACGTGAGAAT
CAGCCTTATGTTTATGGGGATTACAGTATTTTCCTAGCTGAAATTGCCTCAACGACTAATGAAAATATTTTGACCGAAAC
CCTCTTAGAAGAAGTGACTGATGATAAAGAACGTTTTGCTATTCTCAATCATTATTTGGATGGATTTAAAGGAACAATCT
TCCGTCAAACACAATTCGCTGAGTTTGAACTAGCTATCCACCAAGCTGATCAAGCAGGGCAAGTCTTGACTAGCAACTTC
CTCAATAAGACTTATGCTGATTTGAATGAGAAGTATTATGGCTTATCAGCTGAGGACAACCATGAGATTCAGTTTGAATG
GGCTCGTATCCCACATTTCTACTATAATTTCTACGTTTATCAATATGCGACAGGGTTTGCGGCTGCTTCTTATCTAGCAG
ATCGTATTGTTCATGGAACAGACAAAGACCGTGATAACTACTTAGACTATCTCAAAGCTGGTAATTCAGACTATCCACTT
AATGTCATTGCCAAAGCAGGTGTTGACATGACTAGTGCAGATTACCTTGAAGGGGCCTTCAAAGTCTTTGAAGAACGCTT
GGAAGAATTGGAAAACTTAGTCGCAAAACTAAGTTAA

Domains

Predicted by InterproScan.

Peptidase family M3 (Peptidase_M3)

(202-580)

Oligopeptidase F (Peptidase_M3_N)

(112-180)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

71.812

99.666

0.716