Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   P7F70_RS02570 Genome accession   NZ_CP121201
Coordinates   494434..495513 (+) Length   359 a.a.
NCBI ID   WP_278025040.1    Uniprot ID   -
Organism   Streptococcus pluranimalium strain SP28     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 489434..500513
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P7F70_RS02540 (P7F70_02540) - 490152..490334 (+) 183 WP_218654102.1 DUF6440 family protein -
  P7F70_RS02545 (P7F70_02545) - 490617..491132 (+) 516 WP_218654103.1 GNAT family N-acetyltransferase -
  P7F70_RS02550 (P7F70_02550) - 491176..492273 (+) 1098 WP_278025038.1 MmcQ/YjbR family DNA-binding protein -
  P7F70_RS02555 (P7F70_02555) - 492427..493335 (-) 909 WP_256866669.1 diacylglycerol kinase family protein -
  P7F70_RS02560 (P7F70_02560) rsmD 493424..493963 (+) 540 WP_278025039.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  P7F70_RS02565 (P7F70_02565) coaD 493953..494453 (+) 501 WP_104967398.1 pantetheine-phosphate adenylyltransferase -
  P7F70_RS02570 (P7F70_02570) sepM 494434..495513 (+) 1080 WP_278025040.1 SepM family pheromone-processing serine protease Regulator
  P7F70_RS02575 (P7F70_02575) - 495782..496765 (+) 984 WP_218654109.1 LacI family DNA-binding transcriptional regulator -
  P7F70_RS02580 (P7F70_02580) rbsK 496758..497669 (+) 912 WP_278025041.1 ribokinase -
  P7F70_RS02585 (P7F70_02585) rbsD 497644..498042 (+) 399 WP_218654111.1 D-ribose pyranase -
  P7F70_RS02590 (P7F70_02590) - 498055..499533 (+) 1479 WP_218654112.1 sugar ABC transporter ATP-binding protein -
  P7F70_RS02595 (P7F70_02595) rbsC 499535..500479 (+) 945 WP_278025042.1 ribose ABC transporter permease -

Sequence


Protein


Download         Length: 359 a.a.        Molecular weight: 39645.26 Da        Isoelectric Point: 5.3441

>NTDB_id=810988 P7F70_RS02570 WP_278025040.1 494434..495513(+) (sepM) [Streptococcus pluranimalium strain SP28]
MNKQEFKVIEENPKKNSPLKWWLLGIGTAILLAVAFFLPLPYYIEMPGGAYDIRDVLEVDDKEDTAKGSYNFVAISQMQA
TPVALLYAWATPFTDISTAKESLGNYTEEEYIRLNQFYMETSQNEAIYQAFKLADKPVDLKYFGVYVLDVAKHSTFKGIL
GLADTVTGVNGKTFESSKELIDYVAKQKIGDKVTVQYLSDGKEKEASGKIIKLDNGKNGIGIGLVDHTEVETKTPVHFST
GNVGGPSAGLMFTLDILDQINEEDLRKGRMIAGTGTIEKDGSVGDIGGADKKVVSAAKDKAEIFFVPNNPLPKSYLKEHP
DAKTNYQEAKEAAKRIKTDMKIIPVKNVQDAIDYLKKTS

Nucleotide


Download         Length: 1080 bp        

>NTDB_id=810988 P7F70_RS02570 WP_278025040.1 494434..495513(+) (sepM) [Streptococcus pluranimalium strain SP28]
GTGAACAAACAAGAATTTAAAGTCATTGAGGAAAACCCTAAAAAGAATTCCCCTTTAAAATGGTGGTTACTGGGAATTGG
AACAGCTATATTACTGGCTGTTGCCTTCTTTCTCCCGCTGCCTTATTACATTGAAATGCCTGGGGGAGCCTATGATATTC
GTGATGTTTTAGAGGTTGATGACAAAGAAGATACAGCTAAAGGTTCTTATAATTTTGTCGCGATTTCTCAAATGCAAGCA
ACCCCGGTCGCTTTACTTTATGCTTGGGCAACTCCTTTTACCGATATTTCAACTGCTAAGGAAAGTTTGGGAAATTATAC
CGAAGAGGAGTACATTCGCCTCAATCAGTTTTATATGGAAACGTCACAAAATGAAGCGATCTACCAAGCTTTTAAATTAG
CTGACAAACCTGTAGACTTAAAATACTTCGGTGTTTATGTTTTGGATGTTGCTAAGCACTCTACTTTTAAAGGAATTCTA
GGTTTAGCAGATACTGTTACCGGTGTTAATGGTAAAACCTTTGAAAGTTCTAAGGAACTTATTGATTACGTTGCCAAACA
AAAGATTGGGGATAAGGTGACCGTACAATATTTATCTGATGGCAAAGAAAAAGAAGCTTCTGGTAAAATCATTAAGCTAG
ATAATGGCAAAAATGGAATTGGAATAGGACTCGTAGATCATACCGAAGTTGAAACAAAAACGCCAGTTCATTTTTCAACA
GGCAATGTTGGTGGACCGAGTGCAGGTCTTATGTTTACCTTGGATATTCTAGATCAAATCAATGAAGAAGATTTGAGAAA
AGGACGTATGATTGCAGGTACTGGAACGATTGAAAAAGACGGTTCAGTCGGTGATATTGGTGGTGCGGATAAGAAGGTTG
TTTCAGCAGCTAAAGATAAGGCTGAGATTTTCTTTGTTCCAAACAATCCCCTCCCAAAATCTTATTTAAAAGAACACCCA
GATGCTAAAACCAATTATCAGGAAGCCAAAGAAGCTGCTAAGCGTATCAAGACGGACATGAAAATTATTCCAGTCAAGAA
TGTTCAGGATGCGATTGACTACTTGAAAAAAACGTCTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

65.116

95.822

0.624