Detailed information
Bioinformatically predicted
Overview
| Name | luxS | Type | Regulator |
| Locus tag | OPA53_RS06130 | Genome accession | NZ_AP026794 |
| Coordinates | 1261710..1262225 (+) | Length | 171 a.a. |
| NCBI ID | WP_001130208.1 | Uniprot ID | Q8FEP8 |
| Organism | Escherichia coli strain IPCEC48 | ||
| Function | induction of competence (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1256710..1267225
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OPA53_RS06095 (IPCEC48_11890) | csrA | 1257845..1258030 (+) | 186 | WP_000906486.1 | carbon storage regulator CsrA | - |
| OPA53_RS06115 (IPCEC48_11900) | yqaB | 1258940..1259506 (+) | 567 | WP_000273309.1 | fructose-1-phosphate/6-phosphogluconate phosphatase | - |
| OPA53_RS06120 (IPCEC48_11910) | yqaA | 1259503..1259931 (+) | 429 | WP_001287462.1 | YqaA family protein | - |
| OPA53_RS06125 (IPCEC48_11920) | gshA | 1260004..1261560 (+) | 1557 | WP_000611804.1 | glutamate--cysteine ligase | - |
| OPA53_RS06130 (IPCEC48_11930) | luxS | 1261710..1262225 (+) | 516 | WP_001130208.1 | S-ribosylhomocysteine lyase | Regulator |
| OPA53_RS06135 (IPCEC48_11940) | - | 1262276..1263388 (-) | 1113 | WP_000638136.1 | ATP-binding protein | - |
| OPA53_RS06140 (IPCEC48_11950) | - | 1263385..1264092 (-) | 708 | WP_001097132.1 | RNA ligase family protein | - |
| OPA53_RS06145 (IPCEC48_11960) | emrB | 1264350..1265888 (-) | 1539 | WP_001296316.1 | multidrug efflux MFS transporter permease subunit EmrB | - |
| OPA53_RS06150 (IPCEC48_11970) | emrA | 1265905..1267077 (-) | 1173 | WP_001295175.1 | multidrug efflux MFS transporter periplasmic adaptor subunit EmrA | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 19443.21 Da Isoelectric Point: 5.0362
>NTDB_id=81093 OPA53_RS06130 WP_001130208.1 1261710..1262225(+) (luxS) [Escherichia coli strain IPCEC48]
MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGFMRNHLNGNGVEIIDISP
MGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARNILERDVRINSNEELA
LPKEKLQELHI
MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGFMRNHLNGNGVEIIDISP
MGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARNILERDVRINSNEELA
LPKEKLQELHI
Nucleotide
Download Length: 516 bp
>NTDB_id=81093 OPA53_RS06130 WP_001130208.1 1261710..1262225(+) (luxS) [Escherichia coli strain IPCEC48]
ATGCCGTTGTTAGATAGCTTCACAGTCGATCATACCCGGATGGAAGCGCCTGCAGTTCGGGTGGCGAAAACAATGAACAC
CCCGCATGGCGACGCAATCACCGTGTTCGATCTGCGCTTCTGCGTGCCGAACAAAGAAGTGATGCCAGAAAGAGGGATCC
ATACCCTGGAGCACCTGTTTGCTGGTTTTATGCGTAACCATCTTAACGGTAATGGCGTAGAGATTATCGATATCTCGCCA
ATGGGCTGCCGCACCGGTTTTTATATGAGTCTGATTGGTACGCCAGATGAGCAGCGTGTCGCTGATGCCTGGAAAGCGGC
AATGGAAGACGTGCTGAAAGTGCAGGATCAGAATCAGATCCCGGAACTGAACGTCTACCAGTGTGGCACTTACCAGATGC
ACTCGTTGCAGGAAGCGCAGGATATTGCGCGTAACATTCTGGAACGTGACGTGCGCATCAACAGCAACGAAGAACTGGCG
CTGCCGAAAGAGAAGTTGCAGGAACTGCACATTTAG
ATGCCGTTGTTAGATAGCTTCACAGTCGATCATACCCGGATGGAAGCGCCTGCAGTTCGGGTGGCGAAAACAATGAACAC
CCCGCATGGCGACGCAATCACCGTGTTCGATCTGCGCTTCTGCGTGCCGAACAAAGAAGTGATGCCAGAAAGAGGGATCC
ATACCCTGGAGCACCTGTTTGCTGGTTTTATGCGTAACCATCTTAACGGTAATGGCGTAGAGATTATCGATATCTCGCCA
ATGGGCTGCCGCACCGGTTTTTATATGAGTCTGATTGGTACGCCAGATGAGCAGCGTGTCGCTGATGCCTGGAAAGCGGC
AATGGAAGACGTGCTGAAAGTGCAGGATCAGAATCAGATCCCGGAACTGAACGTCTACCAGTGTGGCACTTACCAGATGC
ACTCGTTGCAGGAAGCGCAGGATATTGCGCGTAACATTCTGGAACGTGACGTGCGCATCAACAGCAACGAAGAACTGGCG
CTGCCGAAAGAGAAGTTGCAGGAACTGCACATTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxS | Vibrio cholerae strain A1552 |
73.684 |
100 |
0.737 |