Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   P8R99_RS07210 Genome accession   NZ_CP121160
Coordinates   1341070..1341843 (-) Length   257 a.a.
NCBI ID   WP_000456085.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain S5     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1336070..1346843
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P8R99_RS07185 - 1336840..1336902 (-) 63 Protein_1340 DNA-binding protein -
  P8R99_RS07190 - 1337051..1337248 (-) 198 WP_000285199.1 DUF951 family protein -
  P8R99_RS07195 - 1337258..1338151 (-) 894 WP_000987447.1 diacylglycerol kinase family protein -
  P8R99_RS07200 dnaN 1338209..1339345 (-) 1137 WP_000581132.1 DNA polymerase III subunit beta -
  P8R99_RS07205 dnaA 1339500..1340861 (-) 1362 WP_000138202.1 chromosomal replication initiator protein DnaA -
  P8R99_RS07210 spo0J 1341070..1341843 (-) 774 WP_000456085.1 ParB/RepB/Spo0J family partition protein Regulator
  P8R99_RS07215 htrA 1341941..1343170 (-) 1230 WP_000728357.1 trypsin-like peptidase domain-containing protein Regulator
  P8R99_RS07220 rlmH 1343371..1343850 (+) 480 WP_000768335.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -

Sequence

Protein


Download         Length: 257 a.a.        Molecular weight: 29283.72 Da        Isoelectric Point: 9.6926

>NTDB_id=810675 P8R99_RS07210 WP_000456085.1 1341070..1341843(-) (spo0J) [Streptococcus agalactiae strain S5]
MEYLETININHIAPNPYQPRLEFNTKELEELADSIKINGLIQPIIVRPSAVFGYELVAGERRLRAAKLAKLESIPAIIKS
YNNDDSMQLAIVENLQRSNLSPIEEAKAYSQLLQKKSMTHEELAKYMGKSRPYISNTIRLLNLPPLITSAIEEGKLSSGH
ARALLSLPDASQQKDWYQRILTEDISVRRLEKLLKQEKKTNHKSLQNKDVFLKHQENELAQFLGSKVKLTINKDGAGNIK
IAFDNQEELNRIINTLK

Nucleotide


Download         Length: 774 bp        

>NTDB_id=810675 P8R99_RS07210 WP_000456085.1 1341070..1341843(-) (spo0J) [Streptococcus agalactiae strain S5]
ATGGAATATTTAGAAACGATCAACATCAATCATATTGCTCCAAATCCGTATCAACCTCGCCTAGAATTTAATACAAAAGA
ACTAGAAGAATTAGCCGACTCTATTAAAATTAATGGCCTTATTCAACCCATTATTGTAAGACCGTCAGCAGTCTTTGGTT
ACGAACTGGTAGCCGGAGAACGACGGCTAAGAGCCGCAAAGTTAGCTAAATTGGAAAGTATACCTGCAATTATAAAATCC
TATAATAATGATGATAGTATGCAATTAGCTATTGTCGAAAATTTACAACGATCTAATTTGTCACCTATTGAAGAGGCTAA
AGCCTACTCTCAACTTCTACAAAAGAAAAGTATGACACATGAAGAGTTAGCAAAATATATGGGAAAATCTCGTCCCTATA
TATCAAATACGATACGACTACTAAATTTACCGCCACTAATTACTTCAGCTATTGAAGAAGGAAAACTTTCCTCTGGTCAT
GCGCGTGCACTACTCAGTCTACCAGATGCTAGTCAACAAAAAGATTGGTATCAGAGAATCCTCACTGAAGATATTAGTGT
AAGACGACTAGAGAAGTTATTAAAACAAGAAAAGAAAACAAATCATAAGTCACTTCAAAATAAAGATGTCTTTCTAAAAC
ATCAAGAAAATGAGTTAGCTCAATTTCTAGGTAGCAAAGTGAAACTTACTATTAATAAAGATGGTGCTGGCAATATAAAG
ATTGCTTTCGATAACCAAGAAGAATTAAACAGAATTATCAACACTCTAAAATAA

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(147-196)

ParB/Sulfiredoxin domain (ParB_N)

(6-94)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

57.647

99.222

0.572