Detailed information
Bioinformatically predicted
Overview
| Name | comE | Type | Machinery gene |
| Locus tag | HT078_RS09185 | Genome accession | NZ_AP023071 |
| Coordinates | 1752852..1753247 (-) | Length | 131 a.a. |
| NCBI ID | WP_003703428.1 | Uniprot ID | - |
| Organism | Neisseria gonorrhoeae strain TUM15748 | ||
| Function | DNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1747852..1758247
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HT078_RS09145 (TUM15748C_17940) | - | 1748155..1748400 (-) | 246 | WP_003689849.1 | hypothetical protein | - |
| HT078_RS09150 (TUM15748C_17950) | - | 1748512..1748940 (+) | 429 | WP_020997399.1 | CopD family protein | - |
| HT078_RS09155 (TUM15748C_17960) | - | 1748952..1749428 (+) | 477 | WP_003689851.1 | CYTH domain-containing protein | - |
| HT078_RS09160 (TUM15748C_17970) | - | 1749458..1749946 (-) | 489 | WP_172760411.1 | dihydrofolate reductase | - |
| HT078_RS09165 (TUM15748C_17980) | aroG | 1750014..1751069 (-) | 1056 | WP_003701675.1 | 3-deoxy-7-phosphoheptulonate synthase AroG | - |
| HT078_RS09170 | - | 1751231..1751458 (-) | 228 | WP_153707886.1 | hypothetical protein | - |
| HT078_RS09175 (TUM15748C_17990) | - | 1751686..1751982 (+) | 297 | WP_003689859.1 | hypothetical protein | - |
| HT078_RS09180 (TUM15748C_18000) | - | 1751979..1752218 (+) | 240 | WP_010359213.1 | membrane protein | - |
| HT078_RS12725 | - | 1752771..1752918 (+) | 148 | Protein_1800 | peptidase | - |
| HT078_RS09185 (TUM15748C_18010) | comE | 1752852..1753247 (-) | 396 | WP_003703428.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| HT078_RS12400 | - | 1753349..1753468 (-) | 120 | Protein_1802 | competence protein ComE | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 13796.61 Da Isoelectric Point: 10.8790
>NTDB_id=81044 HT078_RS09185 WP_003703428.1 1752852..1753247(-) (comE) [Neisseria gonorrhoeae strain TUM15748]
MSRGGATPYRFLLIRHIVARCGLLFATLKGKTMKKMFVLFCMLFSCAFSLAAVNINAASQQELEALPGIGPAKAKAIAEY
RAQNGAFKSVDDLIKVKGIGPAVLAKLKDQASVGAPAPKGPAKPVLPAVKK
MSRGGATPYRFLLIRHIVARCGLLFATLKGKTMKKMFVLFCMLFSCAFSLAAVNINAASQQELEALPGIGPAKAKAIAEY
RAQNGAFKSVDDLIKVKGIGPAVLAKLKDQASVGAPAPKGPAKPVLPAVKK
Nucleotide
Download Length: 396 bp
>NTDB_id=81044 HT078_RS09185 WP_003703428.1 1752852..1753247(-) (comE) [Neisseria gonorrhoeae strain TUM15748]
TTGAGCCGGGGCGGGGCAACGCCGTACCGGTTTTTGTTAATCCGCCATATCGTCGCAAGATGCGGTTTGTTGTTTGCAAC
CCTTAAAGGAAAAACCATGAAAAAAATGTTTGTATTGTTCTGTATGCTGTTCTCCTGCGCCTTCTCCCTTGCGGCGGTAA
ACATCAATGCGGCTTCGCAGCAGGAGCTGGAGGCGCTGCCGGGCATAGGCCCGGCGAAGGCGAAGGCCATTGCGGAATAC
CGCGCGCAAAACGGCGCGTTCAAGTCTGTGGACGATTTGATCAAGGTGAAGGGCATCGGTCCGGCGGTGCTGGCGAAGCT
GAAAGACCAGGCTTCCGTCGGCGCGCCCGCACCAAAAGGCCCCGCCAAACCGGTGCTGCCTGCGGTTAAAAAATAG
TTGAGCCGGGGCGGGGCAACGCCGTACCGGTTTTTGTTAATCCGCCATATCGTCGCAAGATGCGGTTTGTTGTTTGCAAC
CCTTAAAGGAAAAACCATGAAAAAAATGTTTGTATTGTTCTGTATGCTGTTCTCCTGCGCCTTCTCCCTTGCGGCGGTAA
ACATCAATGCGGCTTCGCAGCAGGAGCTGGAGGCGCTGCCGGGCATAGGCCCGGCGAAGGCGAAGGCCATTGCGGAATAC
CGCGCGCAAAACGGCGCGTTCAAGTCTGTGGACGATTTGATCAAGGTGAAGGGCATCGGTCCGGCGGTGCTGGCGAAGCT
GAAAGACCAGGCTTCCGTCGGCGCGCCCGCACCAAAAGGCCCCGCCAAACCGGTGCTGCCTGCGGTTAAAAAATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comE | Neisseria gonorrhoeae MS11 |
100 |
100 |
1 |
| comE | Neisseria gonorrhoeae MS11 |
100 |
100 |
1 |
| comE | Neisseria gonorrhoeae MS11 |
100 |
100 |
1 |
| comE | Neisseria gonorrhoeae MS11 |
100 |
100 |
1 |