Detailed information
Bioinformatically predicted
Overview
| Name | pilZ | Type | Machinery gene |
| Locus tag | ROT04_RS10400 | Genome accession | NZ_CP135174 |
| Coordinates | 2212380..2212736 (+) | Length | 118 a.a. |
| NCBI ID | WP_003091119.1 | Uniprot ID | A0A0H2ZD30 |
| Organism | Pseudomonas aeruginosa strain PARM_L1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2207380..2217736
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ROT04_RS10375 (ROT04_10375) | fabF | 2207592..2208836 (+) | 1245 | WP_034082727.1 | beta-ketoacyl-ACP synthase II | - |
| ROT04_RS10380 (ROT04_10380) | pabC | 2208836..2209651 (+) | 816 | WP_003091129.1 | aminodeoxychorismate lyase | - |
| ROT04_RS10385 (ROT04_10385) | mltG | 2209657..2210706 (+) | 1050 | WP_314703461.1 | endolytic transglycosylase MltG | - |
| ROT04_RS10390 (ROT04_10390) | tmk | 2210735..2211367 (+) | 633 | WP_003122486.1 | dTMP kinase | - |
| ROT04_RS10395 (ROT04_10395) | - | 2211360..2212346 (+) | 987 | WP_023875119.1 | DNA polymerase III subunit delta' | - |
| ROT04_RS10400 (ROT04_10400) | pilZ | 2212380..2212736 (+) | 357 | WP_003091119.1 | PilZ domain-containing protein | Machinery gene |
| ROT04_RS10405 (ROT04_10405) | - | 2212751..2213527 (+) | 777 | WP_003091117.1 | TatD family hydrolase | - |
| ROT04_RS10410 (ROT04_10410) | - | 2213753..2214886 (-) | 1134 | WP_033941518.1 | aminotransferase class V-fold PLP-dependent enzyme | - |
| ROT04_RS10415 (ROT04_10415) | - | 2214972..2215610 (+) | 639 | WP_003091114.1 | TetR/AcrR family transcriptional regulator | - |
| ROT04_RS10420 (ROT04_10420) | - | 2215777..2216673 (+) | 897 | WP_003091113.1 | radical SAM protein | - |
| ROT04_RS10425 (ROT04_10425) | - | 2216738..2217370 (+) | 633 | WP_003091112.1 | DUF4823 domain-containing protein | - |
Sequence
Protein
Download Length: 118 a.a. Molecular weight: 12903.98 Da Isoelectric Point: 9.9969
>NTDB_id=810350 ROT04_RS10400 WP_003091119.1 2212380..2212736(+) (pilZ) [Pseudomonas aeruginosa strain PARM_L1]
MSLPPNLGPRNGILSLTIKDKSVLYAAYMPFIRNGGLFIPTNKNYKLGDEVFMLLNLMEEPEKIPVAGKVVWITPKGAQG
NRAAGIGVQFNDGDNTARNKIETYLAGALKSDRPTHTM
MSLPPNLGPRNGILSLTIKDKSVLYAAYMPFIRNGGLFIPTNKNYKLGDEVFMLLNLMEEPEKIPVAGKVVWITPKGAQG
NRAAGIGVQFNDGDNTARNKIETYLAGALKSDRPTHTM
Nucleotide
Download Length: 357 bp
>NTDB_id=810350 ROT04_RS10400 WP_003091119.1 2212380..2212736(+) (pilZ) [Pseudomonas aeruginosa strain PARM_L1]
ATGAGTTTGCCACCCAATCTGGGGCCGCGTAACGGCATCCTGTCCTTGACCATCAAGGACAAGTCCGTGCTGTACGCCGC
CTACATGCCGTTCATCAGGAACGGCGGGCTGTTCATTCCCACCAACAAGAACTACAAGCTTGGCGACGAGGTCTTCATGC
TGCTCAACCTGATGGAAGAGCCGGAGAAGATCCCGGTGGCCGGCAAGGTCGTCTGGATCACCCCGAAGGGCGCCCAGGGC
AACCGTGCGGCGGGCATCGGCGTGCAGTTCAACGACGGTGACAACACCGCCCGCAACAAGATCGAAACCTACCTGGCCGG
GGCGCTGAAGTCGGACCGGCCGACCCACACGATGTAA
ATGAGTTTGCCACCCAATCTGGGGCCGCGTAACGGCATCCTGTCCTTGACCATCAAGGACAAGTCCGTGCTGTACGCCGC
CTACATGCCGTTCATCAGGAACGGCGGGCTGTTCATTCCCACCAACAAGAACTACAAGCTTGGCGACGAGGTCTTCATGC
TGCTCAACCTGATGGAAGAGCCGGAGAAGATCCCGGTGGCCGGCAAGGTCGTCTGGATCACCCCGAAGGGCGCCCAGGGC
AACCGTGCGGCGGGCATCGGCGTGCAGTTCAACGACGGTGACAACACCGCCCGCAACAAGATCGAAACCTACCTGGCCGG
GGCGCTGAAGTCGGACCGGCCGACCCACACGATGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilZ | Legionella pneumophila str. Paris |
49.074 |
91.525 |
0.449 |
| pilZ | Legionella pneumophila strain ERS1305867 |
49.074 |
91.525 |
0.449 |