Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   QN339_RS05600 Genome accession   NZ_CP135104
Coordinates   1100172..1100654 (-) Length   160 a.a.
NCBI ID   WP_000163512.1    Uniprot ID   Q8DZB3
Organism   Streptococcus agalactiae strain MA15     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1095172..1105654
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QN339_RS05580 (QN339_05560) alsS 1095431..1097113 (-) 1683 WP_000140344.1 acetolactate synthase AlsS -
  QN339_RS05585 (QN339_05565) - 1097223..1098449 (-) 1227 WP_000934879.1 tetratricopeptide repeat protein -
  QN339_RS05590 (QN339_05570) - 1098439..1099629 (-) 1191 WP_001081535.1 AI-2E family transporter -
  QN339_RS05595 (QN339_05575) - 1099721..1100182 (-) 462 WP_000796051.1 NUDIX hydrolase -
  QN339_RS05600 (QN339_05580) mutX 1100172..1100654 (-) 483 WP_000163512.1 NUDIX hydrolase Machinery gene
  QN339_RS05605 (QN339_05585) hylB 1100872..1104090 (+) 3219 WP_000403391.1 hyaluronate lyase -
  QN339_RS05610 (QN339_05590) rfbB 1104142..1105188 (-) 1047 WP_410530672.1 dTDP-glucose 4,6-dehydratase -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18837.23 Da        Isoelectric Point: 4.5116

>NTDB_id=810052 QN339_RS05600 WP_000163512.1 1100172..1100654(-) (mutX) [Streptococcus agalactiae strain MA15]
MTKLATICYIDNGKELLLLHRNKKENDVHEGKWISVGGKLEAGETPDECAKREILEETHLTVKKMDFKGVITFPEFTPGH
DWYTYVFKVTDYEGELISDDESREGTLEWVPYDQVLSKPTWQGDYEIFKWILEDVPFFSAKFVYDEHQNLIEKTVNFYEK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=810052 QN339_RS05600 WP_000163512.1 1100172..1100654(-) (mutX) [Streptococcus agalactiae strain MA15]
ATGACTAAATTAGCAACAATTTGTTACATTGACAATGGCAAGGAATTACTTCTATTGCACCGCAACAAAAAAGAGAATGA
TGTTCATGAGGGAAAATGGATCTCGGTAGGCGGTAAACTGGAGGCAGGTGAAACTCCTGATGAATGTGCTAAGCGTGAAA
TTCTAGAAGAAACCCATTTAACAGTAAAAAAAATGGATTTTAAAGGAGTCATCACTTTTCCTGAATTTACGCCAGGTCAT
GATTGGTATACCTATGTCTTTAAAGTAACAGATTATGAAGGAGAGTTAATTTCAGATGATGAATCACGAGAAGGAACTTT
AGAATGGGTACCATATGATCAAGTTCTCTCTAAGCCAACGTGGCAAGGAGATTACGAAATTTTTAAATGGATTTTAGAAG
ATGTTCCTTTCTTTTCTGCTAAGTTTGTTTATGATGAACACCAAAATTTAATTGAAAAGACGGTTAATTTTTATGAAAAA
TAG

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q8DZB3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.698

99.375

0.712