Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   QN328_RS05600 Genome accession   NZ_CP135102
Coordinates   1087625..1088107 (-) Length   160 a.a.
NCBI ID   WP_000163512.1    Uniprot ID   Q8DZB3
Organism   Streptococcus agalactiae strain HU32/21     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1082625..1093107
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QN328_RS05580 (QN328_05550) alsS 1082884..1084566 (-) 1683 WP_000140346.1 acetolactate synthase AlsS -
  QN328_RS05585 (QN328_05555) - 1084676..1085902 (-) 1227 WP_000934876.1 tetratricopeptide repeat protein -
  QN328_RS05590 (QN328_05560) - 1085892..1087082 (-) 1191 WP_001081540.1 AI-2E family transporter -
  QN328_RS05595 (QN328_05565) - 1087174..1087635 (-) 462 WP_000796045.1 NUDIX hydrolase -
  QN328_RS05600 (QN328_05570) mutX 1087625..1088107 (-) 483 WP_000163512.1 NUDIX hydrolase Machinery gene
  QN328_RS05605 (QN328_05575) hylB 1088324..1091557 (+) 3234 WP_410530923.1 hyaluronate lyase -
  QN328_RS05610 (QN328_05580) rfbB 1091609..1092655 (-) 1047 WP_410530924.1 dTDP-glucose 4,6-dehydratase -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18837.23 Da        Isoelectric Point: 4.5116

>NTDB_id=809849 QN328_RS05600 WP_000163512.1 1087625..1088107(-) (mutX) [Streptococcus agalactiae strain HU32/21]
MTKLATICYIDNGKELLLLHRNKKENDVHEGKWISVGGKLEAGETPDECAKREILEETHLTVKKMDFKGVITFPEFTPGH
DWYTYVFKVTDYEGELISDDESREGTLEWVPYDQVLSKPTWQGDYEIFKWILEDVPFFSAKFVYDEHQNLIEKTVNFYEK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=809849 QN328_RS05600 WP_000163512.1 1087625..1088107(-) (mutX) [Streptococcus agalactiae strain HU32/21]
ATGACTAAATTAGCAACAATTTGTTACATTGACAATGGCAAGGAATTACTTCTATTGCACCGCAACAAAAAAGAGAATGA
TGTTCATGAGGGAAAGTGGATCTCGGTAGGCGGTAAACTGGAGGCAGGTGAAACTCCGGATGAATGTGCTAAGCGTGAAA
TTCTAGAAGAAACCCATTTAACAGTAAAAAAAATGGATTTTAAAGGAGTCATCACTTTTCCTGAATTTACGCCAGGTCAT
GATTGGTATACCTATGTCTTTAAAGTAACAGATTATGAAGGAGAGTTAATTTCAGATGATGAATCACGAGAAGGAACCTT
AGAATGGGTACCATATGATCAAGTTCTCTCTAAGCCAACGTGGCAAGGAGATTACGAAATTTTTAAATGGATTTTAGAAG
ATGTTCCTTTCTTTTCTGCTAAGTTTGTTTATGATGAACACCAAAATTTAATTGAAAAGACGGTTAATTTTTATGAAAAA
TAG

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q8DZB3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.698

99.375

0.712