Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   QN325_RS06640 Genome accession   NZ_CP135101
Coordinates   1284014..1284496 (+) Length   160 a.a.
NCBI ID   WP_000163512.1    Uniprot ID   Q8DZB3
Organism   Streptococcus agalactiae strain HU13/21     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1279014..1289496
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QN325_RS06630 (QN325_06615) rfbB 1279465..1280511 (+) 1047 WP_410530672.1 dTDP-glucose 4,6-dehydratase -
  QN325_RS06635 (QN325_06620) hylB 1280563..1283796 (-) 3234 WP_410530673.1 hyaluronate lyase -
  QN325_RS06640 (QN325_06625) mutX 1284014..1284496 (+) 483 WP_000163512.1 NUDIX hydrolase Machinery gene
  QN325_RS06645 (QN325_06630) - 1284486..1284947 (+) 462 WP_000796051.1 NUDIX hydrolase -
  QN325_RS06650 (QN325_06635) - 1285039..1286229 (+) 1191 WP_001081535.1 AI-2E family transporter -
  QN325_RS06655 (QN325_06640) - 1286219..1287445 (+) 1227 WP_000934879.1 tetratricopeptide repeat protein -
  QN325_RS06660 (QN325_06645) alsS 1287555..1289237 (+) 1683 WP_000140344.1 acetolactate synthase AlsS -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18837.23 Da        Isoelectric Point: 4.5116

>NTDB_id=809746 QN325_RS06640 WP_000163512.1 1284014..1284496(+) (mutX) [Streptococcus agalactiae strain HU13/21]
MTKLATICYIDNGKELLLLHRNKKENDVHEGKWISVGGKLEAGETPDECAKREILEETHLTVKKMDFKGVITFPEFTPGH
DWYTYVFKVTDYEGELISDDESREGTLEWVPYDQVLSKPTWQGDYEIFKWILEDVPFFSAKFVYDEHQNLIEKTVNFYEK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=809746 QN325_RS06640 WP_000163512.1 1284014..1284496(+) (mutX) [Streptococcus agalactiae strain HU13/21]
ATGACTAAATTAGCAACAATTTGTTACATTGACAATGGCAAGGAATTACTTCTATTGCACCGCAACAAAAAAGAGAATGA
TGTTCATGAGGGAAAATGGATCTCGGTAGGCGGTAAACTGGAGGCAGGTGAAACTCCTGATGAATGTGCTAAGCGTGAAA
TTCTAGAAGAAACCCATTTAACAGTAAAAAAAATGGATTTTAAAGGAGTCATCACTTTTCCTGAATTTACGCCAGGTCAT
GATTGGTATACCTATGTCTTTAAAGTAACAGATTATGAAGGAGAGTTAATTTCAGATGATGAATCACGAGAAGGAACTTT
AGAATGGGTACCATATGATCAAGTTCTCTCTAAGCCAACGTGGCAAGGAGATTACGAAATTTTTAAATGGATTTTAGAAG
ATGTTCCTTTCTTTTCTGCTAAGTTTGTTTATGATGAACACCAAAATTTAATTGAAAAGACGGTTAATTTTTATGAAAAA
TAG

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q8DZB3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.698

99.375

0.712