Detailed information NTG0809705

Bioinformatically predicted

Overview

• Name: ruvB
• Type: Machinery gene
• Locus tag: QN325_RS01665
• Genome accession: NZ_CP135101
• Coordinates: 298585..299583 (-)
• Length: 332 a.a.
• NCBI ID: WP_000196633.1
• Uniprot ID: Q3K3X8
• Organism: Streptococcus agalactiae strain HU13/21
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 293585..304583

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QN325_RS01650 (QN325_01650)	-	295834..297612 (-)	1779	WP_001220909.1	acyltransferase family protein	-
QN325_RS01655 (QN325_01655)	-	297609..297989 (-)	381	WP_000787700.1	membrane protein	-
QN325_RS01660 (QN325_01660)	-	297996..298433 (-)	438	WP_000754813.1	low molecular weight protein-tyrosine-phosphatase	-
QN325_RS01665 (QN325_01665)	ruvB	298585..299583 (-)	999	WP_000196633.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
QN325_RS01670 (QN325_01670)	comR	299880..300791 (-)	912	WP_000912100.1	helix-turn-helix domain-containing protein	Regulator
QN325_RS01675 (QN325_01675)	purB	300943..302241 (-)	1299	WP_410530731.1	adenylosuccinate lyase	-
QN325_RS01680 (QN325_01680)	-	302261..303106 (-)	846	WP_000613836.1	hypothetical protein	-
QN325_RS01685 (QN325_01685)	-	303238..304482 (-)	1245	Protein_290	DUF4041 domain-containing protein	-

Sequence

Protein

• Length: 332 a.a.
• Molecular weight: 37573.90 Da
• Isoelectric Point: 4.5053

>NTDB_id=809705 QN325_RS01665 WP_000196633.1 298585..299583(-) (ruvB) [Streptococcus agalactiae strain HU13/21]
MTRFLDSDAMGDEELVERTLRPQYLREYIGQDKVKDQLKIFIEAAKLRDESLDHVLLFGPPGLGKTTMAFVIANELGVNL
KQTSGPAIEKSGDLVAILNDLEPGDVLFIDEIHRMPMAVEEVLYSAMEDFYIDIMIGAGETSRSVHLDLPPFTLIGATTR
AGMLSNPLRARFGITGHMEYYEENDLTEIIERTADIFEMKITYEAASELARRSRGTPRIANRLLKRVRDYAQIMGDGLID
DNITDKALTMLDVDHEGLDYVDQKILRTMIEMYNGGPVGLGTLSVNIAEERDTVEDMYEPYLIQKGFIMRTRTGRVATDK
AYEHLGYQRFDK

Nucleotide

• Length: 999 bp

>NTDB_id=809705 QN325_RS01665 WP_000196633.1 298585..299583(-) (ruvB) [Streptococcus agalactiae strain HU13/21]
ATGACAAGATTTTTAGATAGTGATGCAATGGGTGACGAAGAATTGGTAGAACGTACACTTCGTCCGCAGTATTTAAGAGA
GTATATTGGACAAGATAAGGTTAAAGATCAGCTAAAAATATTTATTGAAGCTGCTAAATTGCGTGATGAGTCATTGGATC
ATGTGTTATTATTTGGCCCTCCTGGTTTAGGGAAAACAACCATGGCATTTGTAATTGCTAATGAGTTGGGTGTCAATCTC
AAACAAACATCAGGTCCCGCAATTGAAAAATCAGGGGATTTAGTAGCCATTTTAAATGATTTAGAACCAGGTGATGTTCT
TTTTATTGATGAAATTCATCGTATGCCGATGGCGGTTGAAGAGGTACTTTATAGTGCAATGGAAGACTTCTATATTGACA
TTATGATCGGTGCAGGAGAAACTAGTAGAAGTGTTCATCTAGATTTGCCGCCCTTTACCTTAATTGGTGCAACGACACGT
GCAGGTATGTTATCTAATCCCTTACGTGCTCGCTTTGGTATTACAGGGCATATGGAGTATTATGAAGAAAATGATTTGAC
AGAAATTATTGAGCGTACAGCAGACATTTTTGAAATGAAAATTACTTATGAAGCTGCTTCTGAATTAGCGCGTCGCAGTC
GTGGAACGCCACGTATCGCTAACCGTTTATTGAAACGTGTTCGAGATTATGCTCAAATCATGGGAGATGGTTTGATAGAT
GACAATATTACAGATAAAGCATTAACGATGTTAGATGTTGATCACGAGGGGCTTGATTACGTCGATCAAAAAATCTTAAG
AACCATGATTGAAATGTATAATGGAGGTCCTGTTGGTTTAGGAACTCTATCCGTTAATATTGCTGAAGAACGAGATACTG
TTGAAGACATGTACGAACCTTATTTAATTCAAAAAGGTTTTATTATGCGTACCCGTACCGGTCGTGTAGCTACGGATAAG
GCATATGAACATTTAGGTTATCAGCGATTTGATAAATAA

Domains

Predicted by InterProScan.

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (20-178)

• RuvB C-terminal winged helix domain (WHD_RuvB) (256-325)

• RuvB AAA lid domain (AAA_lid_4) (181-254)

3D structure

• AlphaFold DB: Q3K3X8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvB	Streptococcus pneumoniae TIGR4	90.06	100	0.901
ruvB	Streptococcus pneumoniae R6	89.759	100	0.898
ruvB	Streptococcus pneumoniae D39	89.759	100	0.898
ruvB	Bacillus subtilis subsp. subtilis str. 168	59.819	99.699	0.596
ruvB	Helicobacter pylori 26695	53.074	93.072	0.494
ruvB	Synechocystis sp. PCC 6803	50.479	94.277	0.476