Detailed information
Bioinformatically predicted
Overview
| Name | pilZ | Type | Machinery gene |
| Locus tag | RPM50_RS30380 | Genome accession | NZ_CP135099 |
| Coordinates | 6590921..6591277 (+) | Length | 118 a.a. |
| NCBI ID | WP_003091119.1 | Uniprot ID | A0A0H2ZD30 |
| Organism | Pseudomonas aeruginosa strain Paer3125 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 6585921..6596277
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RPM50_RS30355 (RPM50_30355) | fabF | 6586133..6587377 (+) | 1245 | WP_003104132.1 | beta-ketoacyl-ACP synthase II | - |
| RPM50_RS30360 (RPM50_30360) | pabC | 6587377..6588192 (+) | 816 | WP_033990808.1 | aminodeoxychorismate lyase | - |
| RPM50_RS30365 (RPM50_30365) | mltG | 6588198..6589247 (+) | 1050 | WP_003130717.1 | endolytic transglycosylase MltG | - |
| RPM50_RS30370 (RPM50_30370) | tmk | 6589276..6589908 (+) | 633 | WP_003122486.1 | dTMP kinase | - |
| RPM50_RS30375 (RPM50_30375) | - | 6589901..6590887 (+) | 987 | WP_033990809.1 | DNA polymerase III subunit delta' | - |
| RPM50_RS30380 (RPM50_30380) | pilZ | 6590921..6591277 (+) | 357 | WP_003091119.1 | PilZ domain-containing protein | Machinery gene |
| RPM50_RS30385 (RPM50_30385) | - | 6591292..6592068 (+) | 777 | WP_003091117.1 | TatD family hydrolase | - |
| RPM50_RS30390 (RPM50_30390) | - | 6592294..6593427 (-) | 1134 | WP_003138612.1 | aminotransferase class V-fold PLP-dependent enzyme | - |
| RPM50_RS30395 (RPM50_30395) | - | 6593513..6594152 (+) | 640 | Protein_6000 | TetR/AcrR family transcriptional regulator | - |
| RPM50_RS30400 (RPM50_30400) | - | 6594319..6595215 (+) | 897 | WP_003091113.1 | radical SAM protein | - |
| RPM50_RS30405 (RPM50_30405) | - | 6595280..6595912 (+) | 633 | WP_003091112.1 | DUF4823 domain-containing protein | - |
Sequence
Protein
Download Length: 118 a.a. Molecular weight: 12903.98 Da Isoelectric Point: 9.9969
>NTDB_id=809678 RPM50_RS30380 WP_003091119.1 6590921..6591277(+) (pilZ) [Pseudomonas aeruginosa strain Paer3125]
MSLPPNLGPRNGILSLTIKDKSVLYAAYMPFIRNGGLFIPTNKNYKLGDEVFMLLNLMEEPEKIPVAGKVVWITPKGAQG
NRAAGIGVQFNDGDNTARNKIETYLAGALKSDRPTHTM
MSLPPNLGPRNGILSLTIKDKSVLYAAYMPFIRNGGLFIPTNKNYKLGDEVFMLLNLMEEPEKIPVAGKVVWITPKGAQG
NRAAGIGVQFNDGDNTARNKIETYLAGALKSDRPTHTM
Nucleotide
Download Length: 357 bp
>NTDB_id=809678 RPM50_RS30380 WP_003091119.1 6590921..6591277(+) (pilZ) [Pseudomonas aeruginosa strain Paer3125]
ATGAGTTTGCCACCCAATCTGGGGCCGCGTAACGGCATCCTGTCCTTGACCATCAAGGACAAGTCCGTGCTTTACGCCGC
CTACATGCCGTTCATCAGGAACGGCGGGCTGTTCATTCCCACCAACAAGAACTACAAGCTTGGCGACGAGGTCTTCATGC
TGCTCAACCTGATGGAAGAGCCGGAGAAGATCCCGGTGGCCGGCAAGGTCGTCTGGATCACCCCGAAGGGCGCTCAGGGC
AACCGTGCGGCGGGCATCGGCGTGCAGTTCAACGACGGTGACAACACCGCCCGCAACAAGATCGAAACCTACCTGGCTGG
GGCGCTGAAGTCGGACCGGCCGACCCACACGATGTAA
ATGAGTTTGCCACCCAATCTGGGGCCGCGTAACGGCATCCTGTCCTTGACCATCAAGGACAAGTCCGTGCTTTACGCCGC
CTACATGCCGTTCATCAGGAACGGCGGGCTGTTCATTCCCACCAACAAGAACTACAAGCTTGGCGACGAGGTCTTCATGC
TGCTCAACCTGATGGAAGAGCCGGAGAAGATCCCGGTGGCCGGCAAGGTCGTCTGGATCACCCCGAAGGGCGCTCAGGGC
AACCGTGCGGCGGGCATCGGCGTGCAGTTCAACGACGGTGACAACACCGCCCGCAACAAGATCGAAACCTACCTGGCTGG
GGCGCTGAAGTCGGACCGGCCGACCCACACGATGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilZ | Legionella pneumophila str. Paris |
49.074 |
91.525 |
0.449 |
| pilZ | Legionella pneumophila strain ERS1305867 |
49.074 |
91.525 |
0.449 |