Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   P6M73_RS14100 Genome accession   NZ_CP120965
Coordinates   3073788..3074738 (-) Length   316 a.a.
NCBI ID   WP_277853662.1    Uniprot ID   -
Organism   Proteiniclasticum sp. QWL-01     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3068788..3079738
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P6M73_RS14080 (P6M73_14080) - 3069306..3070529 (-) 1224 WP_277853658.1 ATP-grasp domain-containing protein -
  P6M73_RS14085 (P6M73_14085) - 3070864..3071832 (-) 969 WP_277853659.1 siderophore ABC transporter substrate-binding protein -
  P6M73_RS14090 (P6M73_14090) - 3072051..3072845 (-) 795 WP_277853660.1 ATP-binding cassette domain-containing protein -
  P6M73_RS14095 (P6M73_14095) - 3072847..3073791 (-) 945 WP_277853661.1 iron chelate uptake ABC transporter family permease subunit -
  P6M73_RS14100 (P6M73_14100) ceuB 3073788..3074738 (-) 951 WP_277853662.1 iron chelate uptake ABC transporter family permease subunit Machinery gene
  P6M73_RS14105 (P6M73_14105) - 3074915..3075649 (+) 735 WP_277853663.1 AraC family transcriptional regulator -
  P6M73_RS14110 (P6M73_14110) cysS 3075968..3077449 (+) 1482 WP_277853664.1 cysteine--tRNA ligase -
  P6M73_RS14115 (P6M73_14115) - 3077993..3078805 (+) 813 WP_277853665.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34031.06 Da        Isoelectric Point: 11.2950

>NTDB_id=809664 P6M73_RS14100 WP_277853662.1 3073788..3074738(-) (ceuB) [Proteiniclasticum sp. QWL-01]
MKNHHLILLLLPLALLSLFIGARPVRPAQLLQGGETELFVFALSRVPRLASILLTGSALSISGLILQQITRNKFVSPSTA
ATMDSARMGILFAMIVLPGASTMTKMGIAFAFALAGTFLFLVILGRIKAKSVIVIPLVGIMLGNLIDSVTTFFAYRQEVV
QNMNSWLQGSFAMVTRGRYEIIFLVLPLFGLALFYANQFTIAGLGEDMARNLGLRYRLVVNVGLAIVAMISSAVLVTVGN
IPFIGLIIPNLVSLVRGDHVKNNLWTTALLGALFVLACDVVGRVLIFPYEISISLTAGVAGSMIFLLILARGGKRI

Nucleotide


Download         Length: 951 bp        

>NTDB_id=809664 P6M73_RS14100 WP_277853662.1 3073788..3074738(-) (ceuB) [Proteiniclasticum sp. QWL-01]
ATGAAAAACCATCATCTGATCCTCCTGCTGTTGCCGCTGGCCCTGCTGTCCCTGTTCATCGGCGCTCGTCCGGTTCGACC
GGCCCAGCTGCTGCAGGGCGGGGAAACGGAGCTGTTTGTCTTTGCTCTGAGCCGTGTACCCCGGCTGGCGAGCATTCTCC
TGACCGGCAGTGCTCTGAGTATATCCGGCCTGATTCTGCAGCAGATTACCCGCAACAAGTTTGTTTCTCCCTCCACGGCC
GCCACCATGGACTCAGCCCGCATGGGGATCCTGTTTGCCATGATTGTCCTGCCCGGAGCTTCCACCATGACCAAAATGGG
GATTGCCTTTGCCTTTGCCCTGGCCGGAACGTTTCTGTTTCTTGTGATCCTGGGCCGCATCAAGGCAAAAAGTGTCATTG
TCATTCCCCTGGTGGGCATCATGCTGGGCAATCTGATCGATTCGGTGACCACGTTCTTTGCTTACCGGCAGGAAGTGGTG
CAGAACATGAACTCCTGGCTGCAGGGTTCCTTTGCCATGGTAACCAGGGGGCGGTATGAGATTATTTTTCTCGTGCTGCC
GCTGTTTGGGCTGGCGTTATTTTATGCCAACCAGTTCACCATCGCCGGTCTGGGCGAGGACATGGCCCGGAATCTGGGTC
TGCGCTACCGCCTGGTGGTTAACGTCGGTCTGGCCATCGTGGCCATGATATCCAGCGCCGTCCTGGTGACGGTGGGGAAT
ATCCCGTTCATCGGCCTGATCATCCCCAATCTGGTGTCCCTGGTCAGGGGCGACCATGTCAAGAACAATCTGTGGACTAC
CGCGCTGCTGGGAGCTCTGTTTGTGCTGGCCTGCGATGTCGTGGGCCGGGTTCTCATCTTCCCCTATGAGATCTCGATTT
CGCTGACCGCCGGGGTGGCCGGCAGCATGATTTTTCTGCTGATTCTGGCCAGGGGAGGAAAACGGATATGA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

51.961

96.835

0.503