Detailed information
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | HT085_RS00495 | Genome accession | NZ_AP023069 |
| Coordinates | 105661..106206 (-) | Length | 181 a.a. |
| NCBI ID | WP_003687351.1 | Uniprot ID | - |
| Organism | Neisseria gonorrhoeae strain TUM19854 | ||
| Function | pseudopilus extrusion and retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 100661..111206
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HT085_RS00485 (TUM19854C_00860) | - | 101667..102179 (-) | 513 | WP_003687349.1 | shikimate kinase | - |
| HT085_RS00490 (TUM19854C_00870) | pilQ | 103447..105642 (-) | 2196 | WP_003690569.1 | type IV pilus secretin PilQ | Machinery gene |
| HT085_RS00495 (TUM19854C_00880) | pilP | 105661..106206 (-) | 546 | WP_003687351.1 | pilus assembly protein PilP | Machinery gene |
| HT085_RS00500 (TUM19854C_00890) | pilO | 106224..106871 (-) | 648 | WP_003690570.1 | type 4a pilus biogenesis protein PilO | - |
| HT085_RS00505 (TUM19854C_00900) | pilN | 106872..107471 (-) | 600 | WP_003687354.1 | PilN domain-containing protein | Machinery gene |
| HT085_RS00510 (TUM19854C_00910) | - | 107474..108589 (-) | 1116 | WP_003687356.1 | type IV pilus biogenesis protein PilM | - |
| HT085_RS00515 (TUM19854C_00920) | - | 108741..111137 (+) | 2397 | WP_003690571.1 | penicillin-binding protein 1A | - |
Sequence
Protein
Download Length: 181 a.a. Molecular weight: 20067.60 Da Isoelectric Point: 4.7529
>NTDB_id=80965 HT085_RS00495 WP_003687351.1 105661..106206(-) (pilP) [Neisseria gonorrhoeae strain TUM19854]
MKHYALLISFLALSACSQSSEDLNEWMAQTRREAKAEIIPFQAPTLPVAPVYSPPQLTGPNAFDFRRMETAKKGENAPDT
KRIKETLEKFSLENMRYVGILKSGQKVSGFIEAEGYVYTVGVGNYLGQNYGRIESITDDSIILNELIEDSTGNWVSRKAE
LLLNSSDKNTEQAAAPAAEQN
MKHYALLISFLALSACSQSSEDLNEWMAQTRREAKAEIIPFQAPTLPVAPVYSPPQLTGPNAFDFRRMETAKKGENAPDT
KRIKETLEKFSLENMRYVGILKSGQKVSGFIEAEGYVYTVGVGNYLGQNYGRIESITDDSIILNELIEDSTGNWVSRKAE
LLLNSSDKNTEQAAAPAAEQN
Nucleotide
Download Length: 546 bp
>NTDB_id=80965 HT085_RS00495 WP_003687351.1 105661..106206(-) (pilP) [Neisseria gonorrhoeae strain TUM19854]
ATGAAACACTATGCCTTACTCATCAGCTTTCTGGCTCTCTCCGCGTGTTCCCAAAGTTCTGAAGACCTAAACGAATGGAT
GGCACAAACGCGACGCGAAGCCAAAGCAGAAATCATACCTTTCCAAGCACCTACCCTGCCGGTTGCGCCGGTATACAGCC
CGCCGCAGCTTACAGGGCCGAACGCATTCGACTTCCGCCGCATGGAAACCGCCAAAAAAGGGGAAAATGCCCCCGACACC
AAGCGTATTAAAGAAACGCTGGAAAAATTCAGTTTGGAAAATATGCGTTATGTCGGCATTTTGAAGTCCGGACAGAAAGT
CTCCGGCTTCATCGAGGCTGAAGGTTATGTCTACACTGTCGGTGTCGGCAACTATTTGGGACAAAACTACGGTAGAATCG
AAAGCATTACCGACGACAGCATCATCCTGAACGAGCTGATAGAAGACAGCACGGGCAACTGGGTTTCCCGTAAAGCAGAA
CTGCTGTTGAATTCTTCCGACAAAAACACCGAACAAGCGGCAGCACCTGCCGCAGAACAAAATTAA
ATGAAACACTATGCCTTACTCATCAGCTTTCTGGCTCTCTCCGCGTGTTCCCAAAGTTCTGAAGACCTAAACGAATGGAT
GGCACAAACGCGACGCGAAGCCAAAGCAGAAATCATACCTTTCCAAGCACCTACCCTGCCGGTTGCGCCGGTATACAGCC
CGCCGCAGCTTACAGGGCCGAACGCATTCGACTTCCGCCGCATGGAAACCGCCAAAAAAGGGGAAAATGCCCCCGACACC
AAGCGTATTAAAGAAACGCTGGAAAAATTCAGTTTGGAAAATATGCGTTATGTCGGCATTTTGAAGTCCGGACAGAAAGT
CTCCGGCTTCATCGAGGCTGAAGGTTATGTCTACACTGTCGGTGTCGGCAACTATTTGGGACAAAACTACGGTAGAATCG
AAAGCATTACCGACGACAGCATCATCCTGAACGAGCTGATAGAAGACAGCACGGGCAACTGGGTTTCCCGTAAAGCAGAA
CTGCTGTTGAATTCTTCCGACAAAAACACCGAACAAGCGGCAGCACCTGCCGCAGAACAAAATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Neisseria meningitidis MC58 |
98.343 |
100 |
0.983 |