Detailed information NTG0809645

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: P4G50_RS25510
• Genome accession: NZ_CP120958
• Coordinates: 4968579..4969928 (-)
• Length: 449 a.a.
• NCBI ID: WP_000225359.1
• Uniprot ID: -
• Organism: Bacillus cereus strain SCBCM001
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4963579..4974928

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P4G50_RS25475	-	4963747..4964442 (-)	696	WP_000466505.1	hypothetical protein	-
P4G50_RS25480	-	4964429..4965217 (-)	789	WP_000120052.1	hypothetical protein	-
P4G50_RS25485	-	4965245..4965814 (-)	570	WP_001211060.1	hypothetical protein	-
P4G50_RS25490	-	4965932..4966414 (-)	483	WP_000023374.1	hypothetical protein	-
P4G50_RS25495	raiA	4966686..4967228 (-)	543	WP_000671185.1	ribosome-associated translation inhibitor RaiA	-
P4G50_RS25500	cspC	4967551..4967748 (-)	198	WP_001990088.1	cold shock protein CspC	-
P4G50_RS25505	-	4967875..4968579 (-)	705	WP_033693505.1	ComF family protein	-
P4G50_RS25510	comFA	4968579..4969928 (-)	1350	WP_000225359.1	ATP-dependent helicase ComFA	Machinery gene
P4G50_RS25515	-	4970055..4971500 (-)	1446	WP_000499476.1	C40 family peptidase	-
P4G50_RS25520	-	4971649..4971963 (-)	315	WP_000400857.1	helix-turn-helix domain-containing protein	-
P4G50_RS25525	-	4972136..4972978 (-)	843	WP_000684725.1	DegV family protein	-
P4G50_RS25530	-	4973215..4973850 (+)	636	WP_063538078.1	YigZ family protein	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 51115.96 Da
• Isoelectric Point: 9.9910

>NTDB_id=809645 P4G50_RS25510 WP_000225359.1 4968579..4969928(-) (comFA) [Bacillus cereus strain SCBCM001]
MVAGKQLLLEELSSDLQRKLNDLKKKGEIVCVQGVKKKNSKYMCQRCGNVDRRLFASFLCKRCSKVCTYCRKCITMGRVS
ECAVLVRGIAERKREKNSNLLQWNGTLSTGQNLAAQGVIEAIKQKESFFIWAVCGAGKTEMLFYGINEALQKGERVCIAT
PRTDVVLELAPRLQEVFPYIKVAALYGGSVDKEKDAVLVVATTHQLLRYYRAFHVIVVDEIDAFPYCADQMLQYAVKQAM
KEKAARIYLTATPDETWKRKFRKGEQKGVIVSGRYHRHPLPVPLFCWCGNWKKSLNRERIPRVLLQWLKMYLNKKYPVFL
FVPHVRYIEEISSLLKSLHNKVEGVHAEDPMRKEKVAAFRKGEIPLLVTTTILERGVTVKNLQVAVLGAEEEIFSESALV
QIAGRAGRSFEAPYGEVIYFHYGKTEAMVRAKKHIQGMNKNAKEQGLID

Nucleotide

• Length: 1350 bp

>NTDB_id=809645 P4G50_RS25510 WP_000225359.1 4968579..4969928(-) (comFA) [Bacillus cereus strain SCBCM001]
ATGGTAGCGGGGAAACAGTTGCTATTAGAAGAACTTTCTTCAGATTTACAGAGGAAATTAAACGATTTGAAAAAGAAGGG
AGAGATCGTATGTGTACAAGGTGTAAAAAAGAAGAATTCTAAATATATGTGCCAACGCTGTGGAAATGTAGATCGGCGGC
TATTTGCGTCGTTTTTATGTAAAAGGTGCAGTAAAGTGTGCACATATTGCCGGAAGTGTATAACGATGGGGAGAGTAAGT
GAATGTGCTGTACTTGTTCGCGGGATTGCTGAAAGAAAGAGAGAAAAGAATTCAAATTTGTTACAGTGGAACGGGACGTT
GTCTACTGGCCAGAATTTGGCGGCGCAAGGAGTTATAGAGGCTATTAAGCAAAAAGAATCATTTTTTATTTGGGCTGTAT
GCGGGGCTGGGAAAACAGAGATGTTGTTTTACGGTATTAACGAAGCGCTTCAAAAAGGAGAAAGAGTTTGTATCGCAACG
CCAAGAACGGATGTTGTTTTGGAATTAGCACCGAGATTACAAGAAGTATTTCCATATATAAAGGTAGCGGCTTTATATGG
AGGGAGTGTAGATAAAGAAAAAGATGCAGTACTAGTCGTTGCGACCACGCATCAATTATTACGTTATTATAGGGCGTTTC
ATGTCATAGTTGTAGATGAGATAGATGCTTTTCCATATTGTGCAGATCAAATGTTACAGTACGCGGTAAAACAAGCGATG
AAAGAAAAAGCGGCGCGTATTTATTTAACTGCGACTCCAGATGAAACGTGGAAGCGAAAATTTAGAAAAGGTGAACAAAA
AGGTGTTATTGTTTCTGGACGATATCACCGTCATCCGTTGCCAGTTCCTCTATTTTGCTGGTGCGGAAATTGGAAGAAAA
GCCTCAACCGTGAAAGAATTCCTCGAGTTTTACTACAATGGTTAAAGATGTACTTAAACAAAAAGTATCCTGTTTTTTTA
TTCGTTCCCCATGTACGATATATAGAAGAAATAAGCTCGTTATTGAAATCATTGCATAATAAAGTTGAAGGGGTACATGC
AGAAGATCCGATGAGAAAAGAGAAAGTCGCAGCGTTCAGAAAGGGAGAAATCCCATTATTAGTTACAACGACAATTTTAG
AGCGAGGCGTAACGGTGAAAAATTTGCAAGTTGCAGTTTTAGGGGCGGAAGAAGAAATATTTTCAGAAAGTGCGCTCGTA
CAAATTGCGGGCCGAGCAGGGCGGAGCTTTGAAGCACCATATGGAGAGGTCATTTATTTTCACTATGGCAAGACAGAGGC
GATGGTGCGCGCGAAAAAACATATTCAAGGTATGAATAAAAATGCGAAAGAACAAGGATTGATCGATTAA

Domains

Predicted by InterproScan.

• Helicase conserved C-terminal domain (Helicase_C) (313-408)

• Type III restriction enzyme, res subunit (ResIII) (107-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	52.632	93.096	0.49