Detailed information NTG0809588

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: PYR84_RS07090
• Genome accession: NZ_CP120956
• Coordinates: 1544653..1545876 (-)
• Length: 407 a.a.
• NCBI ID: WP_277849475.1
• Uniprot ID: A0AAX3SQQ5
• Organism: Delftia tsuruhatensis strain Ery-6A
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1539653..1550876

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PYR84_RS07075 (PYR84_07075)	-	1540529..1541500 (-)	972	WP_277849474.1	hypothetical protein	-
PYR84_RS07080 (PYR84_07080)	-	1541511..1542638 (-)	1128	WP_082145145.1	hypothetical protein	-
PYR84_RS07085 (PYR84_07085)	-	1542983..1543720 (-)	738	WP_223275154.1	GntR family transcriptional regulator	-
PYR84_RS07090 (PYR84_07090)	pilA	1544653..1545876 (-)	1224	WP_277849475.1	signal recognition particle-docking protein FtsY	Machinery gene
PYR84_RS07095 (PYR84_07095)	-	1545905..1547383 (+)	1479	WP_277849476.1	pitrilysin family protein	-
PYR84_RS07100 (PYR84_07100)	-	1547410..1548771 (+)	1362	WP_016454147.1	pitrilysin family protein	-
PYR84_RS07105 (PYR84_07105)	rsmD	1548768..1549475 (+)	708	WP_070080628.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
PYR84_RS07110 (PYR84_07110)	coaD	1549606..1550106 (+)	501	WP_016449072.1	pantetheine-phosphate adenylyltransferase	-

Sequence

Protein

• Length: 407 a.a.
• Molecular weight: 42535.39 Da
• Isoelectric Point: 5.5266

>NTDB_id=809588 PYR84_RS07090 WP_277849475.1 1544653..1545876(-) (pilA) [Delftia tsuruhatensis strain Ery-6A]
MFSFFKKKPTPSSAEISPADSSAAPEEAGIPATPPQDRAPDLPPGTPAPPAAADTGSAWWRKPFGGGGKGDAAPPAAPTA
PTAAASTLAPADFIAAPEPTAKPEAEGASRQNWMQRLKAGLRKTGSSIATVFTGTQINDALYEELEDALLMADTGVKATE
HLLTDLRRRVKEAKATDPAAVKALLADALADLLRPLEKPLIIGEHQPTVVMVAGVNGAGKTTSIGKLTKHLADEGQSVLL
AAADTFRAAAREQLGVWANRNTVEIVSQEGGDPAAVSFDAVTAGRARKKDVVLVDTAGRLPTQLHLMEELRKIRRVVTKA
DATAPHEVLLVIDGNTGQNALAQVRAFDDALQLTGLIVTKLDGTAKGGVLAAIAQERPIPVYFIGVGEKVEDLETFNARE
FAQALLS

Nucleotide

• Length: 1224 bp

>NTDB_id=809588 PYR84_RS07090 WP_277849475.1 1544653..1545876(-) (pilA) [Delftia tsuruhatensis strain Ery-6A]
ATGTTCAGTTTTTTCAAGAAAAAGCCCACCCCCTCCTCCGCCGAGATTTCCCCGGCGGACAGCAGCGCCGCGCCTGAAGA
GGCCGGCATTCCCGCAACCCCGCCGCAGGACCGCGCCCCAGACCTGCCCCCTGGCACGCCTGCCCCACCGGCCGCAGCCG
ACACCGGCAGCGCCTGGTGGCGCAAGCCCTTCGGCGGCGGCGGCAAGGGCGATGCCGCCCCGCCTGCCGCACCCACTGCA
CCCACTGCTGCTGCTTCCACGCTCGCGCCTGCCGACTTCATTGCCGCACCCGAGCCCACGGCCAAGCCCGAAGCCGAAGG
CGCCAGCCGCCAGAACTGGATGCAGCGCCTCAAGGCCGGACTGCGCAAGACCGGCAGCAGCATCGCCACGGTCTTCACCG
GCACGCAGATCAACGATGCGCTGTACGAAGAGCTGGAAGACGCCCTGCTGATGGCCGACACCGGCGTCAAGGCCACCGAG
CACCTGCTCACCGACCTGCGCCGCCGCGTCAAGGAAGCCAAGGCCACCGACCCCGCCGCCGTCAAGGCGCTGCTGGCCGA
TGCACTGGCCGACCTGCTGCGCCCGCTGGAAAAGCCGCTGATCATCGGCGAGCACCAGCCTACCGTGGTCATGGTCGCTG
GCGTCAACGGCGCAGGCAAGACCACCTCCATCGGCAAGCTGACCAAGCATCTGGCCGACGAAGGCCAGAGCGTGCTGCTG
GCTGCCGCCGACACCTTCCGCGCCGCCGCGCGCGAGCAGCTCGGCGTCTGGGCCAACCGCAACACGGTGGAGATCGTCAG
CCAGGAAGGCGGTGATCCTGCAGCCGTGAGCTTTGATGCCGTCACCGCCGGCCGCGCCCGCAAGAAAGATGTGGTGCTGG
TGGACACGGCGGGCCGCCTGCCCACCCAGCTGCACCTGATGGAAGAGCTGCGCAAGATCCGCCGCGTGGTCACCAAGGCC
GATGCCACGGCACCGCACGAGGTGCTGCTGGTCATCGACGGCAACACCGGCCAGAACGCGCTGGCCCAGGTGCGCGCCTT
TGACGATGCACTGCAGCTCACGGGCCTGATCGTCACCAAGCTCGACGGCACGGCCAAGGGCGGCGTGCTGGCCGCCATTG
CCCAGGAACGGCCGATCCCCGTGTACTTCATCGGCGTGGGCGAAAAGGTCGAAGACCTGGAGACCTTCAACGCCAGGGAA
TTCGCGCAGGCGCTGCTGTCCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (126-189)

• SRP54-type protein, GTPase domain (SRP54) (207-406)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	48.113	100	0.501