Detailed information NTG0809526

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: P4E65_RS15835
• Genome accession: NZ_CP120947
• Coordinates: 3416910..3418064 (+)
• Length: 384 a.a.
• NCBI ID: WP_039346088.1
• Uniprot ID: -
• Organism: Burkholderia contaminans strain 5080
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3411910..3423064

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P4E65_RS15805 (P4E65_15805)	-	3412553..3413158 (+)	606	WP_039346059.1	50S ribosomal protein L25/general stress protein Ctc	-
P4E65_RS15810 (P4E65_15810)	pth	3413280..3413879 (+)	600	WP_039346068.1	aminoacyl-tRNA hydrolase	-
P4E65_RS15815 (P4E65_15815)	hisC	3413994..3415061 (+)	1068	WP_039346080.1	histidinol-phosphate transaminase	-
P4E65_RS15820 (P4E65_15820)	-	3415145..3415411 (-)	267	WP_039346082.1	YfhL family 4Fe-4S dicluster ferredoxin	-
P4E65_RS15825 (P4E65_15825)	coaD	3415471..3415968 (-)	498	WP_039346084.1	pantetheine-phosphate adenylyltransferase	-
P4E65_RS15830 (P4E65_15830)	rsmD	3416080..3416694 (-)	615	WP_039346086.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
P4E65_RS15835 (P4E65_15835)	pilA	3416910..3418064 (+)	1155	WP_039346088.1	signal recognition particle-docking protein FtsY	Machinery gene
P4E65_RS15840 (P4E65_15840)	maiA	3418150..3418794 (-)	645	WP_039346506.1	maleylacetoacetate isomerase	-
P4E65_RS15845 (P4E65_15845)	ybiB	3418983..3419957 (+)	975	WP_039346089.1	DNA-binding protein YbiB	-
P4E65_RS15850 (P4E65_15850)	leuA	3420338..3421984 (+)	1647	WP_039346090.1	2-isopropylmalate synthase	-
P4E65_RS15855 (P4E65_15855)	-	3422128..3422511 (-)	384	WP_039346091.1	nuclear transport factor 2 family protein	-

Sequence

Protein

• Length: 384 a.a.
• Molecular weight: 40942.88 Da
• Isoelectric Point: 4.7979

>NTDB_id=809526 P4E65_RS15835 WP_039346088.1 3416910..3418064(+) (pilA) [Burkholderia contaminans strain 5080]
MFSFFKRFKKTQEPDPAESQSADAQQTDEPSDAPAVEAPPVADVPQAPAQPAAPAVVMTVTPTNDGRDEVVETVEIVPPP
LQDATAKKSWLARLKTGLAKTGSSITGVFVNTKIDEDLYEELETALLMSDAGVDATEYLLGALREKVRTGRLTDPQQVKA
ALHDLLVELLTPLEKSLMLGRAQPLVMMITGVNGAGKTTSIGKLAKHLQSFDQSVLLAAGDTFRAAAREQLAVWGERNNV
TVVQQESGDPAAVIFDAVSAARARKIDVMMADTAGRLPTQLHLMEELKKVKRVISKAHDGAPHEVLLVIDANTGQNALTQ
VKAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEKVEDLQPFSAVEFADALLG

Nucleotide

• Length: 1155 bp

>NTDB_id=809526 P4E65_RS15835 WP_039346088.1 3416910..3418064(+) (pilA) [Burkholderia contaminans strain 5080]
ATGTTCAGCTTCTTCAAACGATTCAAGAAAACGCAGGAGCCCGATCCGGCGGAATCGCAATCGGCCGACGCGCAGCAAAC
GGACGAGCCGTCCGACGCGCCCGCGGTCGAGGCCCCGCCTGTGGCCGACGTGCCGCAAGCGCCCGCACAACCGGCCGCGC
CGGCCGTCGTGATGACGGTCACGCCGACCAACGACGGCCGCGACGAAGTCGTCGAGACGGTCGAGATCGTCCCGCCGCCG
CTGCAGGACGCCACCGCGAAGAAATCGTGGCTTGCGCGCCTGAAAACGGGGCTCGCGAAGACGGGCTCGAGCATCACCGG
CGTGTTCGTCAACACGAAGATCGACGAGGATCTGTACGAGGAGCTCGAAACCGCGCTGCTGATGTCCGACGCGGGCGTCG
ACGCGACCGAGTACCTGCTCGGCGCGCTGCGCGAAAAGGTGCGCACCGGCCGCCTGACCGACCCGCAGCAGGTGAAGGCC
GCGCTGCACGACCTGCTCGTCGAGCTGCTGACGCCGCTCGAGAAATCGCTGATGCTCGGCCGCGCGCAGCCGCTCGTGAT
GATGATCACCGGCGTGAACGGCGCCGGCAAGACGACCAGCATCGGCAAGCTCGCGAAGCATCTGCAGAGCTTCGACCAGT
CGGTGCTGCTGGCCGCGGGCGACACGTTCCGCGCGGCCGCGCGCGAACAGCTGGCAGTCTGGGGCGAGCGCAACAACGTG
ACGGTCGTGCAGCAGGAAAGCGGCGATCCGGCCGCGGTGATCTTCGACGCGGTCAGCGCAGCGCGCGCGCGCAAGATCGA
CGTGATGATGGCCGACACGGCCGGCCGCCTGCCGACGCAGCTCCACCTGATGGAAGAGCTGAAGAAGGTGAAGCGCGTGA
TCTCGAAGGCGCACGACGGCGCGCCGCACGAGGTGCTGCTGGTGATCGACGCGAACACCGGCCAGAACGCGCTCACGCAG
GTCAAGGCATTCGACGACGCGCTCGGCCTCACCGGCCTCATCGTCACGAAGCTCGACGGCACCGCGAAGGGCGGGATTCT
CGCTGCGATCGCGCGTCAGCGTCCGGTGCCGGTCTACTTCATCGGCGTCGGCGAAAAGGTCGAGGATCTGCAGCCGTTCA
GCGCGGTCGAATTCGCGGACGCGCTGCTCGGCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (102-164)

• SRP54-type protein, GTPase domain (SRP54) (185-384)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.606	100	0.581