Detailed information
Bioinformatically predicted
Overview
| Name | pilZ | Type | Machinery gene |
| Locus tag | RPM48_RS04200 | Genome accession | NZ_CP135095 |
| Coordinates | 895961..896317 (+) | Length | 118 a.a. |
| NCBI ID | WP_003091119.1 | Uniprot ID | A0A0H2ZD30 |
| Organism | Pseudomonas aeruginosa strain Paer3771 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 890961..901317
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RPM48_RS04175 (RPM48_04175) | fabF | 891173..892417 (+) | 1245 | WP_003104132.1 | beta-ketoacyl-ACP synthase II | - |
| RPM48_RS04180 (RPM48_04180) | pabC | 892417..893232 (+) | 816 | WP_003091129.1 | aminodeoxychorismate lyase | - |
| RPM48_RS04185 (RPM48_04185) | mltG | 893238..894287 (+) | 1050 | WP_003091127.1 | endolytic transglycosylase MltG | - |
| RPM48_RS04190 (RPM48_04190) | tmk | 894316..894948 (+) | 633 | WP_003091125.1 | dTMP kinase | - |
| RPM48_RS04195 (RPM48_04195) | - | 894941..895927 (+) | 987 | WP_003091122.1 | DNA polymerase III subunit delta' | - |
| RPM48_RS04200 (RPM48_04200) | pilZ | 895961..896317 (+) | 357 | WP_003091119.1 | PilZ domain-containing protein | Machinery gene |
| RPM48_RS04205 (RPM48_04205) | - | 896332..897108 (+) | 777 | WP_003091117.1 | TatD family hydrolase | - |
| RPM48_RS04210 (RPM48_04210) | - | 897334..898467 (-) | 1134 | WP_003091115.1 | aminotransferase class V-fold PLP-dependent enzyme | - |
| RPM48_RS04215 (RPM48_04215) | - | 898553..899191 (+) | 639 | WP_003091114.1 | TetR/AcrR family transcriptional regulator | - |
| RPM48_RS04220 (RPM48_04220) | - | 899341..900237 (+) | 897 | WP_003091113.1 | radical SAM protein | - |
| RPM48_RS04225 (RPM48_04225) | - | 900302..900934 (+) | 633 | WP_003091112.1 | DUF4823 domain-containing protein | - |
Sequence
Protein
Download Length: 118 a.a. Molecular weight: 12903.98 Da Isoelectric Point: 9.9969
>NTDB_id=809284 RPM48_RS04200 WP_003091119.1 895961..896317(+) (pilZ) [Pseudomonas aeruginosa strain Paer3771]
MSLPPNLGPRNGILSLTIKDKSVLYAAYMPFIRNGGLFIPTNKNYKLGDEVFMLLNLMEEPEKIPVAGKVVWITPKGAQG
NRAAGIGVQFNDGDNTARNKIETYLAGALKSDRPTHTM
MSLPPNLGPRNGILSLTIKDKSVLYAAYMPFIRNGGLFIPTNKNYKLGDEVFMLLNLMEEPEKIPVAGKVVWITPKGAQG
NRAAGIGVQFNDGDNTARNKIETYLAGALKSDRPTHTM
Nucleotide
Download Length: 357 bp
>NTDB_id=809284 RPM48_RS04200 WP_003091119.1 895961..896317(+) (pilZ) [Pseudomonas aeruginosa strain Paer3771]
ATGAGTTTGCCACCCAATCTGGGGCCGCGTAACGGCATCCTGTCCTTGACCATCAAGGACAAGTCCGTGCTTTACGCCGC
CTACATGCCGTTCATCAGGAACGGCGGGCTGTTCATTCCCACCAACAAGAACTACAAGCTTGGCGACGAGGTCTTCATGC
TGCTCAACCTGATGGAAGAGCCGGAGAAGATCCCGGTGGCCGGCAAGGTCGTCTGGATCACCCCGAAGGGCGCTCAGGGC
AACCGTGCGGCGGGCATCGGCGTGCAGTTCAACGACGGTGACAACACCGCCCGCAACAAGATCGAAACCTACCTGGCCGG
GGCGCTGAAGTCGGACCGGCCGACCCACACGATGTAA
ATGAGTTTGCCACCCAATCTGGGGCCGCGTAACGGCATCCTGTCCTTGACCATCAAGGACAAGTCCGTGCTTTACGCCGC
CTACATGCCGTTCATCAGGAACGGCGGGCTGTTCATTCCCACCAACAAGAACTACAAGCTTGGCGACGAGGTCTTCATGC
TGCTCAACCTGATGGAAGAGCCGGAGAAGATCCCGGTGGCCGGCAAGGTCGTCTGGATCACCCCGAAGGGCGCTCAGGGC
AACCGTGCGGCGGGCATCGGCGTGCAGTTCAACGACGGTGACAACACCGCCCGCAACAAGATCGAAACCTACCTGGCCGG
GGCGCTGAAGTCGGACCGGCCGACCCACACGATGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilZ | Legionella pneumophila str. Paris |
49.074 |
91.525 |
0.449 |
| pilZ | Legionella pneumophila strain ERS1305867 |
49.074 |
91.525 |
0.449 |