Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   P3X35_RS09830 Genome accession   NZ_CP120920
Coordinates   1942443..1942919 (+) Length   158 a.a.
NCBI ID   WP_020451568.1    Uniprot ID   A0A6N2GNG1
Organism   Bacillus paralicheniformis strain SYN-191     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1937443..1947919
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P3X35_RS09805 (P3X35_09805) - 1938560..1939537 (+) 978 WP_020451563.1 alpha/beta hydrolase family protein -
  P3X35_RS09810 (P3X35_09810) - 1939598..1939825 (+) 228 WP_023857612.1 hypothetical protein -
  P3X35_RS09815 (P3X35_09815) - 1940522..1941118 (+) 597 WP_020451565.1 class I SAM-dependent methyltransferase -
  P3X35_RS09820 (P3X35_09820) - 1941224..1941706 (+) 483 WP_020451566.1 DUF4944 domain-containing protein -
  P3X35_RS09825 (P3X35_09825) - 1941740..1942312 (+) 573 WP_020451567.1 GNAT family N-acetyltransferase -
  P3X35_RS09830 (P3X35_09830) rok 1942443..1942919 (+) 477 WP_020451568.1 hypothetical protein Regulator
  P3X35_RS09835 (P3X35_09835) - 1943041..1943211 (+) 171 WP_162157328.1 hypothetical protein -
  P3X35_RS09840 (P3X35_09840) - 1943564..1944184 (-) 621 WP_020451570.1 hypothetical protein -
  P3X35_RS09845 (P3X35_09845) - 1944745..1945329 (+) 585 WP_020451571.1 TetR family transcriptional regulator -
  P3X35_RS09850 (P3X35_09850) - 1945410..1945742 (+) 333 WP_020451572.1 multidrug efflux SMR transporter -
  P3X35_RS09855 (P3X35_09855) - 1945745..1946062 (+) 318 WP_020451573.1 multidrug efflux SMR transporter -
  P3X35_RS09860 (P3X35_09860) speG 1946091..1946633 (+) 543 WP_020451574.1 spermidine N1-acetyltransferase -
  P3X35_RS09865 (P3X35_09865) - 1946670..1947026 (-) 357 WP_023857605.1 YxeA family protein -
  P3X35_RS09870 (P3X35_09870) - 1947226..1947645 (+) 420 WP_237585340.1 hypothetical protein -

Sequence

Protein


Download         Length: 158 a.a.        Molecular weight: 18322.18 Da        Isoelectric Point: 10.0056

>NTDB_id=809276 P3X35_RS09830 WP_020451568.1 1942443..1942919(+) (rok) [Bacillus paralicheniformis strain SYN-191]
MFDEREALRLRLEQLGDAEIQVMRELRKERQDIYSKLRELDRESDPAINKKSSLIDLASAAAEELKQSQIAADKHPPIKT
PSHTIFQSKTTIQREAALNILSRYEEGLKGIKLKTEIEKETGFPIKNMTTFMKSLMKHRPDIKKPARGHYILHKEKDL

Nucleotide


Download         Length: 477 bp        

>NTDB_id=809276 P3X35_RS09830 WP_020451568.1 1942443..1942919(+) (rok) [Bacillus paralicheniformis strain SYN-191]
ATGTTCGACGAAAGAGAAGCGTTGCGTTTGAGACTTGAACAGCTAGGTGATGCGGAGATTCAGGTGATGCGGGAATTGCG
AAAAGAACGACAGGACATTTATTCGAAGCTGCGTGAATTGGACCGGGAGAGTGATCCCGCAATTAACAAAAAATCTTCAT
TGATCGACTTGGCAAGCGCTGCAGCAGAGGAATTAAAACAATCCCAAATTGCCGCTGACAAACATCCGCCCATCAAGACT
CCATCTCATACTATTTTCCAATCAAAAACAACCATACAGCGCGAGGCTGCCTTAAACATTTTAAGCCGCTATGAAGAGGG
CTTGAAAGGCATTAAGCTCAAAACTGAAATCGAGAAAGAAACCGGCTTTCCGATTAAAAACATGACGACATTTATGAAGA
GCTTAATGAAACATCGCCCAGATATTAAAAAGCCTGCCCGCGGCCATTATATTTTGCATAAAGAAAAAGACCTTTGA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6N2GNG1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

43.407

100

0.5