Detailed information NTG0809243

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: RMP66_RS08380
• Genome accession: NZ_CP135094
• Coordinates: 1684314..1687139 (-)
• Length: 941 a.a.
• NCBI ID: WP_024417775.1
• Uniprot ID: -
• Organism: Streptococcus suis strain 1547095
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1679314..1692139

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RMP66_RS08355 (RMP66_08355)	-	1680659..1681624 (+)	966	WP_002942449.1	LacI family DNA-binding transcriptional regulator	-
RMP66_RS08360 (RMP66_08360)	nusB	1681704..1682123 (-)	420	WP_002938276.1	transcription antitermination factor NusB	-
RMP66_RS08365 (RMP66_08365)	-	1682113..1682505 (-)	393	WP_002942446.1	Asp23/Gls24 family envelope stress response protein	-
RMP66_RS08370 (RMP66_08370)	efp	1682533..1683090 (-)	558	WP_002942436.1	elongation factor P	-
RMP66_RS08375 (RMP66_08375)	-	1683154..1684215 (-)	1062	WP_024394956.1	Xaa-Pro peptidase family protein	-
RMP66_RS08380 (RMP66_08380)	uvrA	1684314..1687139 (-)	2826	WP_024417775.1	excinuclease ABC subunit UvrA	Machinery gene
RMP66_RS08385 (RMP66_08385)	-	1687933..1688877 (+)	945	WP_002939248.1	magnesium transporter CorA family protein	-
RMP66_RS08390 (RMP66_08390)	-	1688893..1689549 (+)	657	WP_012027735.1	DUF1129 domain-containing protein	-
RMP66_RS08395 (RMP66_08395)	rpsR	1689784..1690023 (-)	240	WP_002939250.1	30S ribosomal protein S18	-
RMP66_RS08400 (RMP66_08400)	ssbA	1690056..1690550 (-)	495	WP_002942409.1	single-stranded DNA-binding protein	Machinery gene
RMP66_RS08405 (RMP66_08405)	rpsF	1690562..1690852 (-)	291	WP_002942403.1	30S ribosomal protein S6	-
RMP66_RS08410 (RMP66_08410)	-	1691024..1692013 (-)	990	WP_313910474.1	lipoate--protein ligase	-

Sequence

Protein

• Length: 941 a.a.
• Molecular weight: 103919.09 Da
• Isoelectric Point: 5.9796

>NTDB_id=809243 RMP66_RS08380 WP_024417775.1 1684314..1687139(-) (uvrA) [Streptococcus suis strain 1547095]
MQENIVIHGARAHNLKNIDVTIPREKLVVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLGNMDKPDVDSIEGL
SPAISIDQKTTSRNPRSTVGTATEINDYLRLLYARVGVPYCINGHGAIAASSVEQIVDEVLELPERQRLQILAPIVRKKK
GQHKTIFEKIQKDGYVRVRVNGDVYDVSEVPELSKSKAHNIEVVVDRIVIKEGIRSRLFDSIEAALRIADGYVIIDTMDE
KELLFSEYYACPVCGFTVPELEPRLFSFNAPFGSCSDCDGLGMKLEVDTDLIVPDASKTLREGALAPWNPISSNYYPQML
EQAMNHFGVDMDKPFEELTDEEKNLIFNGSDGKEFHFHYENEFGGVRDIDIPFEGLITNINRRYRETNSDYTRTVMKTYM
NELTCGTCHGYRLNDQALSVKVGGEQGLHIGQLSDLSVADHLEVIENLTLSENEATIATPIVKEIKDRLTFLNNVGLNYL
TLSRAAGTLSGGESQRIRLATQIGSNLSGVLYILDEPSIGLHQRDNDRLIASLKKMRDLGNTLIVVEHDEDTMREADWLI
DIGPGAGVFGGEIVASGTPAQVAKNKKSITGQYLSGKREIPVPLERRVGNGRFLEVTGAKENNLQDVTVRFPLGKFVAVT
GVSGSGKSTLVNSILKKAIAQKLNRNSDKPGKFKSISGIEHLDRLIDIDQSPIGRTPRSNPATYTGVFDDIRDLFAQTNE
AKIRGYKKGRFSFNVKGGRCEACSGDGIIKIEMHFLPDVFVPCEVCHGHRYNSETLEVHYKEKNIAQVLDMTVNDAVEFF
KHIPKIERKLRTIQDVGLGYVTLGQPATTLSGGEAQRMKLASELHKRSTGKSLYILDEPTTGLHTEDIAQLLKVLARFVD
DGNTVLVIEHNLDVIKTADHIIDMGPEGGVGGGTVVATGTPEEVAENPASFTGQYLKMKLK

Nucleotide

• Length: 2826 bp

>NTDB_id=809243 RMP66_RS08380 WP_024417775.1 1684314..1687139(-) (uvrA) [Streptococcus suis strain 1547095]
ATGCAAGAAAATATTGTGATTCATGGGGCGCGTGCCCATAATTTGAAAAATATTGATGTGACCATTCCGCGTGAGAAGTT
GGTGGTGGTGACTGGTTTGTCAGGCTCTGGTAAGTCGAGTTTGGCTTTTGATACCTTGTATGCCGAAGGCCAACGCCGCT
ACGTAGAGTCCTTGTCTGCCTATGCTCGTCAGTTCTTGGGCAACATGGACAAGCCAGATGTGGATTCCATAGAGGGTCTC
AGCCCTGCTATTTCCATTGACCAAAAAACAACCTCGCGTAATCCGCGTTCGACAGTCGGTACAGCGACGGAAATCAATGA
CTATCTCCGCCTGCTCTATGCTCGAGTTGGGGTGCCTTACTGTATCAACGGGCACGGGGCGATTGCGGCTTCTTCGGTGG
AGCAGATCGTCGATGAGGTCTTGGAATTGCCAGAACGCCAGCGTTTGCAGATTCTAGCTCCGATTGTCCGCAAGAAAAAG
GGTCAGCATAAGACTATTTTTGAGAAAATCCAGAAGGATGGCTATGTTCGGGTTCGTGTCAATGGTGATGTCTATGATGT
GTCGGAAGTGCCCGAGTTGTCCAAGAGCAAGGCTCATAATATTGAAGTCGTTGTCGATCGAATTGTGATAAAAGAAGGTA
TTCGCTCTCGGCTTTTCGATTCTATCGAAGCGGCCCTGCGGATTGCGGACGGCTATGTCATCATCGACACCATGGATGAG
AAGGAACTGCTCTTCTCTGAGTACTATGCCTGCCCAGTTTGTGGCTTTACGGTACCAGAGTTGGAGCCTCGTCTTTTCTC
TTTCAATGCTCCTTTTGGGTCTTGTAGCGATTGTGACGGTTTGGGCATGAAGCTGGAAGTGGATACGGATTTGATTGTCC
CAGATGCCAGCAAGACCTTGCGTGAGGGTGCTTTGGCTCCGTGGAATCCAATCTCATCCAACTACTATCCTCAGATGTTG
GAACAGGCTATGAACCATTTTGGTGTGGATATGGACAAGCCTTTTGAGGAATTGACGGATGAGGAGAAGAACCTGATTTT
CAACGGCTCGGACGGCAAAGAATTCCATTTCCATTATGAAAATGAGTTCGGTGGGGTGCGTGATATTGATATTCCATTTG
AAGGATTGATTACCAACATTAACCGTCGCTACCGTGAAACCAACAGTGACTATACGCGGACGGTTATGAAGACTTACATG
AATGAGCTGACCTGTGGAACTTGCCACGGCTATCGCCTCAATGACCAAGCCCTGTCTGTCAAAGTTGGTGGCGAGCAGGG
ACTTCATATCGGGCAGTTGTCTGATTTGTCCGTAGCGGATCATCTGGAAGTCATTGAAAATCTGACCTTGTCTGAAAATG
AAGCCACCATTGCAACACCGATTGTCAAGGAAATCAAGGATCGCCTGACCTTCCTCAACAACGTTGGTCTTAACTACCTG
ACGCTGTCCCGAGCAGCTGGAACCCTATCAGGTGGTGAGAGTCAGCGGATTCGTTTGGCGACTCAGATTGGCTCAAACCT
GTCTGGTGTCCTTTACATCTTGGATGAGCCGTCAATTGGTCTGCACCAGCGGGACAATGACCGCCTCATTGCCAGCCTGA
AAAAGATGCGTGATTTGGGCAATACCTTGATTGTGGTGGAGCATGATGAGGACACCATGCGGGAGGCGGACTGGTTGATT
GACATCGGTCCAGGTGCGGGTGTCTTTGGCGGAGAAATCGTGGCTTCTGGAACGCCTGCCCAAGTAGCTAAAAATAAAAA
ATCCATTACAGGCCAGTACCTGTCTGGTAAACGTGAAATTCCAGTTCCTCTAGAACGTCGTGTTGGCAATGGTCGTTTCC
TGGAGGTAACAGGTGCCAAGGAAAATAACCTGCAAGATGTGACTGTTCGTTTCCCGCTCGGAAAATTTGTAGCGGTGACA
GGGGTGTCTGGCTCAGGTAAGTCAACTCTGGTCAATTCCATTCTGAAAAAAGCTATTGCTCAGAAACTCAATCGCAATTC
GGACAAGCCAGGTAAGTTCAAGTCTATTTCAGGAATTGAACACTTGGACCGCCTGATTGATATTGACCAAAGCCCGATTG
GACGAACACCGCGTTCCAATCCAGCTACCTACACAGGTGTCTTTGACGATATTCGGGATTTGTTTGCCCAGACCAATGAA
GCCAAAATCCGTGGCTACAAGAAAGGACGTTTCTCCTTTAACGTCAAAGGTGGTCGTTGTGAGGCTTGTTCTGGTGATGG
TATCATCAAGATTGAAATGCACTTCCTGCCAGATGTCTTTGTGCCATGTGAGGTCTGTCATGGACACCGTTACAATTCTG
AAACCTTGGAAGTACATTACAAGGAGAAAAATATCGCCCAAGTCCTTGATATGACGGTCAATGATGCGGTCGAGTTCTTC
AAGCATATTCCAAAAATTGAGCGGAAACTTCGTACTATTCAAGATGTAGGTTTGGGCTACGTTACTCTAGGTCAGCCAGC
AACGACCCTATCAGGTGGGGAAGCCCAGCGTATGAAGTTGGCTTCTGAACTCCACAAGCGGTCAACTGGTAAATCCTTGT
ATATCTTGGATGAGCCGACGACAGGTCTGCATACGGAGGACATTGCCCAGTTGCTCAAGGTCTTGGCCCGCTTTGTTGAT
GATGGCAATACCGTGCTGGTCATCGAGCACAATCTGGATGTCATCAAGACAGCCGACCACATTATCGACATGGGGCCAGA
AGGTGGTGTTGGTGGTGGTACCGTTGTTGCGACAGGAACACCAGAAGAAGTAGCAGAGAACCCAGCCAGCTTTACAGGTC
AATATTTGAAAATGAAGTTGAAATAA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (624-860)

• UvrA interaction domain (UvrA_inter) (132-238)

• UvrA DNA-binding domain (UvrA_DNA-bind) (288-396)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	89.362	99.894	0.893
uvrA	Streptococcus pneumoniae TIGR4	89.362	99.894	0.893
uvrA	Streptococcus pneumoniae D39	89.362	99.894	0.893