Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   RMP66_RS01815 Genome accession   NZ_CP135094
Coordinates   357824..358600 (+) Length   258 a.a.
NCBI ID   WP_024394875.1    Uniprot ID   -
Organism   Streptococcus suis strain 1547095     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 352824..363600
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RMP66_RS01805 (RMP66_01805) - 355946..356149 (-) 204 Protein_312 transposase -
  RMP66_RS01810 (RMP66_01810) rlmD 356434..357786 (-) 1353 WP_012775501.1 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -
  RMP66_RS01815 (RMP66_01815) recX 357824..358600 (+) 777 WP_024394875.1 recombination regulator RecX Regulator
  RMP66_RS01820 (RMP66_01820) - 358866..360029 (-) 1164 Protein_315 IS30 family transposase -
  RMP66_RS01825 (RMP66_01825) - 360227..360868 (+) 642 WP_024394531.1 amino acid ABC transporter permease -
  RMP66_RS01830 (RMP66_01830) - 360878..361510 (+) 633 WP_009909533.1 amino acid ABC transporter ATP-binding protein -
  RMP66_RS01835 (RMP66_01835) - 361537..362367 (+) 831 WP_024381444.1 amino acid ABC transporter substrate-binding protein -

Sequence

Protein


Download         Length: 258 a.a.        Molecular weight: 30405.95 Da        Isoelectric Point: 9.1130

>NTDB_id=809198 RMP66_RS01815 WP_024394875.1 357824..358600(+) (recX) [Streptococcus suis strain 1547095]
MRITKIEKKKRLYLLEVDGQDSLYITEDTIVRFMLSKGKEITEQEFCELRDFAQFSYGKNLALYYLSFKQRTKKEVSDYL
KKYEIEENNIVKIVTVLEEEKWLDDGNYVDSYVRQNALNGDKGPAMIRQKLMQKGIPKLLIDKRLAEEDFSELAGKIGEK
LVGRYQRKLPLRALQDKVVQGLMGKGFSYETAKQSLGQLELVADEENEDDLIAKELDKQYRKYSRKYEGYELKQRLIQAL
ARKGYDFDRIQAVLRDYR

Nucleotide


Download         Length: 777 bp        

>NTDB_id=809198 RMP66_RS01815 WP_024394875.1 357824..358600(+) (recX) [Streptococcus suis strain 1547095]
ATGAGAATTACAAAAATTGAAAAGAAGAAACGTCTTTATTTACTTGAAGTGGATGGTCAGGATAGTTTATATATTACGGA
AGACACAATTGTTCGCTTCATGCTTAGTAAGGGAAAGGAAATCACGGAGCAGGAGTTTTGTGAGCTTCGCGATTTTGCTC
AGTTTTCTTATGGGAAAAATCTAGCACTTTATTACCTTTCCTTCAAGCAACGTACCAAAAAAGAAGTTAGTGATTATCTA
AAAAAATATGAAATTGAAGAAAACAATATTGTTAAGATAGTGACGGTACTAGAAGAGGAAAAATGGCTGGACGATGGGAA
TTATGTTGATAGCTATGTCCGTCAGAATGCTCTAAATGGAGATAAGGGACCAGCTATGATTCGTCAGAAGTTGATGCAGA
AAGGAATTCCTAAACTGCTGATTGATAAAAGGCTGGCAGAGGAAGATTTTTCAGAGCTTGCTGGGAAGATTGGGGAGAAA
TTGGTGGGTAGATACCAAAGAAAATTGCCTCTTCGAGCTTTGCAAGATAAAGTTGTACAGGGATTGATGGGGAAGGGTTT
TTCTTATGAGACGGCCAAACAAAGCCTGGGTCAGTTGGAACTTGTGGCTGATGAGGAAAATGAAGATGATTTAATCGCCA
AGGAATTGGATAAGCAGTATAGAAAATATAGTCGTAAATATGAAGGCTACGAATTGAAGCAAAGGTTGATACAGGCTTTG
GCTCGAAAGGGTTATGACTTTGATCGGATTCAGGCTGTCCTTCGTGATTATCGGTAA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(80-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

35.581

100

0.368