Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   HT079_RS02620 Genome accession   NZ_AP023067
Coordinates   515403..515864 (-) Length   153 a.a.
NCBI ID   WP_003688187.1    Uniprot ID   A0AA44U815
Organism   Neisseria gonorrhoeae strain TUM19853     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 510403..520864
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HT079_RS02595 (TUM19853C_04840) - 510701..512257 (+) 1557 WP_003693413.1 TerC family protein -
  HT079_RS02600 (TUM19853C_04850) surE 512274..513020 (+) 747 WP_003690973.1 5'/3'-nucleotidase SurE -
  HT079_RS02605 (TUM19853C_04860) - 513122..514135 (+) 1014 WP_025455876.1 peptidoglycan DD-metalloendopeptidase family protein -
  HT079_RS02610 (TUM19853C_04870) - 514533..515015 (-) 483 WP_003688183.1 acyl-CoA thioesterase -
  HT079_RS02615 (TUM19853C_04880) - 515168..515329 (-) 162 WP_010358395.1 hypothetical protein -
  HT079_RS02620 (TUM19853C_04890) recX 515403..515864 (-) 462 WP_003688187.1 recombination regulator RecX Regulator
  HT079_RS02625 (TUM19853C_04900) - 515937..516647 (-) 711 WP_104691784.1 phosphoglycolate phosphatase -
  HT079_RS02630 - 517042..518261 (+) 1220 Protein_492 Glu/Leu/Phe/Val dehydrogenase -
  HT079_RS02635 (TUM19853C_04930) - 518321..519127 (-) 807 WP_003690982.1 DUF4198 domain-containing protein -
  HT079_RS02640 (TUM19853C_04940) - 519319..519528 (+) 210 WP_003688192.1 4-oxalocrotonate tautomerase family protein -
  HT079_RS02645 (TUM19853C_04950) - 519617..520831 (+) 1215 WP_003690983.1 pyridoxal phosphate-dependent aminotransferase -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17745.13 Da        Isoelectric Point: 10.4361

>NTDB_id=80919 HT079_RS02620 WP_003688187.1 515403..515864(-) (recX) [Neisseria gonorrhoeae strain TUM19853]
MKPQKSLRARAMDILSRQEVSRIGLKRKLAPHAESEEELENVLNEFAERNWQSDLRYAEAYIRSKSRKHGSLRLKQALAQ
QGIDEKTSRNLLPDRSSEKQAAIAVLRKKFKHPAANLKEKQKQARFLAYRGFDADTVQTALKHAWDENWEDSC

Nucleotide


Download         Length: 462 bp        

>NTDB_id=80919 HT079_RS02620 WP_003688187.1 515403..515864(-) (recX) [Neisseria gonorrhoeae strain TUM19853]
ATGAAACCGCAAAAATCCCTACGCGCCCGCGCGATGGACATCCTCTCGCGCCAAGAAGTCAGCCGCATCGGTCTGAAACG
CAAACTTGCACCGCACGCCGAAAGCGAAGAGGAGTTGGAAAACGTGTTAAACGAATTTGCCGAACGCAACTGGCAGTCGG
ATTTGCGCTACGCCGAAGCCTATATCCGCAGCAAAAGCCGCAAACACGGTTCATTGAGGCTGAAACAGGCTTTGGCGCAA
CAGGGCATAGATGAAAAAACCAGCCGCAACCTGCTTCCCGACCGCTCAAGCGAAAAGCAAGCCGCCATAGCCGTGTTGCG
TAAAAAATTCAAACACCCCGCCGCCAACCTCAAAGAAAAACAAAAACAGGCGCGTTTCCTCGCCTATCGCGGTTTTGATG
CCGATACCGTTCAGACGGCATTGAAACACGCTTGGGACGAAAATTGGGAAGACAGCTGCTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(30-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

100

100

1

Multiple sequence alignment