Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   RMQ61_RS07220 Genome accession   NZ_CP135090
Coordinates   1464811..1465293 (+) Length   160 a.a.
NCBI ID   WP_313919258.1    Uniprot ID   -
Organism   Streptococcus suis strain ID48908     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1459811..1470293
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RMQ61_RS07195 (RMQ61_07200) - 1461060..1462370 (-) 1311 WP_044683219.1 GntP family permease -
  RMQ61_RS07200 (RMQ61_07205) folK 1462420..1462908 (-) 489 WP_023369979.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  RMQ61_RS07205 (RMQ61_07210) folB 1462905..1463267 (-) 363 WP_012027113.1 dihydroneopterin aldolase -
  RMQ61_RS07210 (RMQ61_07215) folP 1463260..1464072 (-) 813 WP_313926226.1 dihydropteroate synthase -
  RMQ61_RS07215 (RMQ61_07220) folE 1464081..1464644 (-) 564 WP_002938082.1 GTP cyclohydrolase I FolE -
  RMQ61_RS07220 (RMQ61_07225) mutX 1464811..1465293 (+) 483 WP_313919258.1 8-oxo-dGTP diphosphatase Machinery gene
  RMQ61_RS07225 (RMQ61_07230) - 1465341..1466018 (-) 678 WP_313919260.1 DUF4956 domain-containing protein -
  RMQ61_RS07230 (RMQ61_07235) - 1466005..1466748 (-) 744 WP_313919262.1 polyphosphate polymerase domain-containing protein -
  RMQ61_RS07235 (RMQ61_07240) - 1466941..1467243 (+) 303 WP_023369992.1 hypothetical protein -
  RMQ61_RS07240 (RMQ61_07245) - 1467264..1467530 (-) 267 WP_313919264.1 DUF2087 domain-containing protein -
  RMQ61_RS07245 (RMQ61_07250) pheT 1467585..1469984 (-) 2400 WP_313919266.1 phenylalanine--tRNA ligase subunit beta -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18567.91 Da        Isoelectric Point: 4.4960

>NTDB_id=809042 RMQ61_RS07220 WP_313919258.1 1464811..1465293(+) (mutX) [Streptococcus suis strain ID48908]
MTKKPVQLATICYIDNGKEFLLLHRNKKENDVHQGKWIGVGGKLEPGETPQACAIREVFEETGLTVTKHALKGVITFPDF
TPNTDWYTYVFKITSFEGNLIDCNEGDLEWVPYDQVLSKPTWEGDRHFQEWLLEDKPFFSACFRYDGDKLLDYGVDFYEE

Nucleotide


Download         Length: 483 bp        

>NTDB_id=809042 RMQ61_RS07220 WP_313919258.1 1464811..1465293(+) (mutX) [Streptococcus suis strain ID48908]
ATGACCAAGAAACCCGTCCAACTCGCTACCATTTGCTACATTGATAATGGCAAGGAATTTCTCCTGCTCCATCGCAATAA
AAAAGAAAACGATGTCCATCAAGGGAAATGGATTGGGGTCGGTGGCAAGCTGGAACCTGGTGAAACACCGCAAGCCTGTG
CCATTCGAGAAGTCTTTGAGGAAACTGGGCTTACTGTAACGAAGCATGCTCTAAAAGGAGTGATAACCTTCCCAGACTTT
ACTCCAAACACTGACTGGTACACCTATGTCTTTAAGATAACGAGTTTTGAAGGAAATCTTATTGACTGCAACGAAGGCGA
TTTAGAATGGGTTCCTTATGACCAAGTCTTGTCCAAACCAACTTGGGAGGGCGACCGGCATTTTCAAGAATGGCTATTAG
AGGACAAACCATTTTTCTCCGCTTGCTTCCGCTATGATGGGGACAAACTGCTTGACTATGGCGTTGATTTTTATGAAGAA
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(8-132)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

81.046

95.625

0.775