Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiE   Type   Regulator
Locus tag   RMQ61_RS02815 Genome accession   NZ_CP135090
Coordinates   549038..549772 (+) Length   244 a.a.
NCBI ID   WP_002943067.1    Uniprot ID   A0A0H3MU26
Organism   Streptococcus suis strain ID48908     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 544038..554772
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RMQ61_RS02790 (RMQ61_02790) - 544538..544846 (-) 309 WP_002938710.1 DUF1827 family protein -
  RMQ61_RS02795 (RMQ61_02795) - 544901..545362 (-) 462 WP_002938708.1 NUDIX hydrolase -
  RMQ61_RS02800 (RMQ61_02800) clpE 545548..547776 (-) 2229 WP_313926487.1 ATP-dependent Clp protease ATP-binding subunit Regulator
  RMQ61_RS02805 (RMQ61_02805) - 548000..548230 (+) 231 WP_002938704.1 DUF1797 family protein -
  RMQ61_RS02810 (RMQ61_02810) - 548356..549045 (+) 690 WP_002938702.1 amino acid ABC transporter permease -
  RMQ61_RS02815 (RMQ61_02815) amiE 549038..549772 (+) 735 WP_002943067.1 amino acid ABC transporter ATP-binding protein Regulator
  RMQ61_RS02820 (RMQ61_02820) - 549902..550750 (+) 849 WP_313926488.1 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase -
  RMQ61_RS02825 (RMQ61_02825) - 550993..551442 (+) 450 WP_313926489.1 YSIRK-type signal peptide-containing protein -
  RMQ61_RS02830 (RMQ61_02830) - 551462..551755 (+) 294 WP_313926490.1 hypothetical protein -
  RMQ61_RS02835 (RMQ61_02835) - 551763..552254 (+) 492 WP_313926491.1 hypothetical protein -
  RMQ61_RS02840 (RMQ61_02840) - 552507..553208 (-) 702 WP_099776509.1 CPBP family intramembrane glutamic endopeptidase -
  RMQ61_RS02845 (RMQ61_02845) scnR 553645..554295 (+) 651 WP_024376704.1 response regulator transcription factor Regulator

Sequence

Protein


Download         Length: 244 a.a.        Molecular weight: 26881.11 Da        Isoelectric Point: 4.7252

>NTDB_id=809016 RMQ61_RS02815 WP_002943067.1 549038..549772(+) (amiE) [Streptococcus suis strain ID48908]
MSNAIISIKDLHKYFGKNEVLKGIDLDIQQGQVVVIIGPSGSGKSTFLRTMNLLEVPTKGTVTFEGVDITDKSNDIFKMR
EKMGMVFQQFNLFPNMTVLDNITLSPIKTKGIAKDEAEKKAKELLEKVGLPDKANAYPQSLSGGQQQRIAIARGLAMDPD
VLLFDEPTSALDPEMVGEVLAVMQDLAKSGMTMVIVTHEMGFAREVADRVIFMDGGVIVEDGTPEEVFEHTKEERTKDFL
SKVL

Nucleotide


Download         Length: 735 bp        

>NTDB_id=809016 RMQ61_RS02815 WP_002943067.1 549038..549772(+) (amiE) [Streptococcus suis strain ID48908]
ATGTCTAATGCGATTATTTCTATCAAGGATTTACATAAGTACTTCGGAAAGAATGAGGTTCTAAAAGGAATTGATTTAGA
TATTCAACAAGGTCAGGTGGTCGTTATTATCGGTCCATCAGGGTCAGGGAAATCGACTTTCTTACGTACAATGAACCTCT
TAGAAGTGCCAACCAAGGGAACTGTTACATTTGAAGGTGTTGATATTACTGACAAGTCAAATGATATTTTCAAGATGCGT
GAAAAGATGGGAATGGTTTTTCAACAGTTCAATCTTTTTCCGAATATGACGGTATTAGATAATATTACTTTATCACCTAT
TAAGACAAAGGGAATTGCAAAGGATGAGGCTGAGAAGAAGGCTAAGGAATTACTTGAAAAGGTAGGATTGCCAGATAAGG
CCAATGCCTATCCACAAAGCCTTTCAGGTGGTCAGCAACAACGGATCGCTATTGCACGTGGTCTGGCCATGGACCCAGAT
GTCCTACTTTTTGATGAACCGACCTCTGCACTAGACCCTGAAATGGTTGGTGAAGTTCTTGCTGTAATGCAGGATTTGGC
CAAGTCAGGGATGACCATGGTTATCGTGACTCATGAGATGGGATTTGCGCGTGAGGTAGCTGACAGGGTTATCTTTATGG
ATGGCGGTGTCATCGTGGAGGATGGAACGCCTGAAGAAGTCTTTGAACATACCAAGGAAGAACGGACTAAGGATTTCTTG
TCTAAGGTCTTGTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(21-169)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H3MU26

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

34.496

100

0.365
  amiE Streptococcus thermophilus LMG 18311

34.496

100

0.365
  amiE Streptococcus thermophilus LMD-9

34.496

100

0.365