Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   P4829_RS07970 Genome accession   NZ_CP120846
Coordinates   1537000..1537575 (+) Length   191 a.a.
NCBI ID   WP_003327252.1    Uniprot ID   -
Organism   Bacillus atrophaeus strain MBLB1156     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1532000..1542575
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P4829_RS07940 (P4829_07940) dapD 1532120..1532830 (+) 711 WP_003327258.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  P4829_RS07945 (P4829_07945) - 1532903..1534027 (+) 1125 WP_063637622.1 N-acetyldiaminopimelate deacetylase -
  P4829_RS07950 (P4829_07950) - 1534088..1534333 (+) 246 WP_003327256.1 YkuS family protein -
  P4829_RS07955 (P4829_07955) - 1534372..1535175 (-) 804 WP_003327255.1 mechanosensitive ion channel family protein -
  P4829_RS07960 (P4829_07960) ahpA 1535426..1535968 (+) 543 WP_003327254.1 biofilm-specific peroxidase AhpA -
  P4829_RS07965 (P4829_07965) - 1536053..1536511 (+) 459 WP_003327253.1 TlpA disulfide reductase family protein -
  P4829_RS07970 (P4829_07970) rok 1537000..1537575 (+) 576 WP_003327252.1 transcriptional regulator Rok Regulator
  P4829_RS07975 (P4829_07975) - 1537621..1538580 (-) 960 WP_003327251.1 hypothetical protein -
  P4829_RS07980 (P4829_07980) - 1538724..1539308 (+) 585 WP_063637623.1 molybdenum cofactor guanylyltransferase -
  P4829_RS07985 (P4829_07985) - 1539380..1540399 (+) 1020 WP_010788468.1 MoeB/ThiF family adenylyltransferase -
  P4829_RS07990 (P4829_07990) glp 1540419..1541711 (+) 1293 WP_063637624.1 gephyrin-like molybdotransferase Glp -
  P4829_RS07995 (P4829_07995) mobB 1541672..1542196 (+) 525 WP_010788470.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21713.65 Da        Isoelectric Point: 9.8783

>NTDB_id=808840 P4829_RS07970 WP_003327252.1 1537000..1537575(+) (rok) [Bacillus atrophaeus strain MBLB1156]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSSAAETKKDFRPERKSESLPVLAELAAQEIRSYQPQ
QASQPQPQSISSIPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQSL
IKMYPEVKKPYRGQYILEGEIASDSAENVTE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=808840 P4829_RS07970 WP_003327252.1 1537000..1537575(+) (rok) [Bacillus atrophaeus strain MBLB1156]
ATGTTTAATGAGAGGGAAGCTTTACGCTTGCGTTTGGAACAGTTAAATGAGGCTGAGGTTAAAGTCATCCGTGAATATCA
AATAGAGCGTGACAAAATATATGCAAAACTAAGAGAGCTTGACCGCAATGGAAGCTCAGCAGCGGAAACAAAAAAAGATT
TTCGCCCTGAAAGAAAAAGTGAGTCTCTTCCTGTGCTGGCCGAGCTTGCAGCACAAGAGATCAGAAGCTATCAGCCGCAG
CAGGCATCACAGCCGCAGCCGCAATCCATCTCTTCTATTCCGGCGGGTATTCCGGACGGAACGACAAGAAGAAGAAGAGG
AACGGCAAGACCGGGTTCAAAGGCAGCAAAGCTTCGTGAAGCGGCAATCAAAACATTAAAACGCCATAACGCAGCGATCA
AAAGCTCCGAACTTCAAAAGGAAATTGAGAAGGAAAGCGGGCTTGAAATCCCTAATATGACAACGTTTATGCAAAGTTTA
ATTAAAATGTATCCGGAAGTGAAAAAGCCATATCGCGGCCAGTACATTTTAGAAGGCGAAATCGCTTCAGACTCTGCTGA
AAATGTGACTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

86.598

100

0.88