Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   P4829_RS04580 Genome accession   NZ_CP120846
Coordinates   927299..928090 (+) Length   263 a.a.
NCBI ID   WP_004430590.1    Uniprot ID   -
Organism   Bacillus atrophaeus strain MBLB1156     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 922299..933090
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P4829_RS04550 (P4829_04550) - 923143..924156 (+) 1014 WP_087941833.1 iron ABC transporter permease -
  P4829_RS04555 (P4829_04555) - 924273..925154 (+) 882 WP_063638875.1 PhzF family phenazine biosynthesis isomerase -
  P4829_RS04560 (P4829_04560) - 925235..925819 (+) 585 WP_010788002.1 nitroreductase -
  P4829_RS04565 (P4829_04565) - 925859..926050 (-) 192 WP_004430587.1 YfhD family protein -
  P4829_RS04570 (P4829_04570) - 926128..926238 (-) 111 WP_003223230.1 YfhE family protein -
  P4829_RS04575 (P4829_04575) - 926297..927208 (-) 912 WP_063638874.1 TIGR01777 family oxidoreductase -
  P4829_RS04580 (P4829_04580) recX 927299..928090 (+) 792 WP_004430590.1 recombination regulator RecX Regulator
  P4829_RS04585 (P4829_04585) - 928098..928424 (+) 327 WP_063638873.1 YfhH family protein -
  P4829_RS04590 (P4829_04590) - 928558..929757 (+) 1200 WP_063638872.1 MFS transporter -
  P4829_RS04595 (P4829_04595) - 929798..929950 (-) 153 WP_004430596.1 small, acid-soluble spore protein K -
  P4829_RS04600 (P4829_04600) - 930067..930336 (+) 270 WP_004430597.1 YfhJ family protein -
  P4829_RS04605 (P4829_04605) - 930464..931000 (+) 537 WP_010788007.1 SH3 domain-containing protein -
  P4829_RS04610 (P4829_04610) - 931174..931521 (+) 348 WP_010788008.1 SdpI family protein -
  P4829_RS04615 (P4829_04615) - 931508..932374 (+) 867 WP_063638871.1 alpha/beta hydrolase -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30952.20 Da        Isoelectric Point: 7.4549

>NTDB_id=808821 P4829_RS04580 WP_004430590.1 927299..928090(+) (recX) [Bacillus atrophaeus strain MBLB1156]
MPFITKITTQKKTTERFNIFLDNKYAFSVDADVLVKFDLKKGKELDDLDIVEIQYGDEVKKGFNRALEFLSYRMRSTKEV
TDHLKKKEISDPAITEIIHKLNDYRYLNDKEFAEAYASTHKKTNGKGPDVLYKELRSKGIDDDTIKETLSTFSFEEQTEE
ALKHIGKILKKEKKLSTKEIKQRAQMLLQRKGFSFDVITAALEQTEYANDEDTEREALRQHAEKALRKYRYDGSYESKMK
VKQYLFRKGFSLDMIDQFLQEEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=808821 P4829_RS04580 WP_004430590.1 927299..928090(+) (recX) [Bacillus atrophaeus strain MBLB1156]
ATGCCGTTTATCACGAAAATCACAACGCAGAAAAAAACGACCGAGCGCTTTAACATTTTTCTCGATAATAAATATGCTTT
CAGTGTGGATGCGGACGTACTCGTCAAATTCGACCTGAAAAAAGGAAAAGAACTCGACGACCTTGATATCGTTGAAATTC
AATACGGGGATGAAGTAAAGAAAGGCTTTAACCGGGCGCTTGAATTTTTATCATACCGGATGCGCTCAACAAAAGAGGTA
ACGGACCATTTAAAGAAGAAAGAAATTTCAGATCCGGCCATTACAGAAATCATCCATAAGCTGAATGATTATCGCTATCT
GAATGATAAAGAGTTCGCAGAAGCTTATGCGAGCACACATAAGAAAACAAATGGAAAGGGACCGGACGTTCTTTATAAAG
AGTTAAGGTCAAAGGGGATCGACGATGATACGATCAAAGAGACATTGAGCACATTTTCTTTTGAGGAACAGACAGAAGAG
GCGCTGAAGCATATTGGAAAAATCCTAAAAAAAGAAAAAAAGCTCTCTACAAAAGAAATCAAGCAGCGAGCGCAAATGCT
TTTGCAGCGAAAGGGCTTCTCCTTCGACGTCATCACAGCGGCGCTTGAGCAGACCGAGTATGCAAACGATGAAGATACAG
AAAGGGAAGCGTTACGGCAGCACGCTGAAAAGGCGCTAAGAAAATACCGATATGACGGCTCCTACGAGAGCAAAATGAAG
GTAAAACAATATTTATTCAGAAAAGGATTCTCACTGGATATGATTGACCAATTTCTGCAGGAAGAGGAGTAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-206)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

82.89

100

0.829