Detailed information    

insolico Bioinformatically predicted

Overview


Name   comS   Type   Regulator
Locus tag   P4829_RS01990 Genome accession   NZ_CP120846
Coordinates   400596..400736 (+) Length   46 a.a.
NCBI ID   WP_231104944.1    Uniprot ID   -
Organism   Bacillus atrophaeus strain MBLB1156     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 395596..405736
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P4829_RS01980 (P4829_01980) - 397464..400244 (+) 2781 WP_277780800.1 amino acid adenylation domain-containing protein -
  P4829_RS01985 (P4829_01985) - 400166..400507 (+) 342 Protein_357 phosphopantetheine-binding protein -
  P4829_RS01990 (P4829_01990) comS 400596..400736 (+) 141 WP_231104944.1 competence protein ComS Regulator
  P4829_RS21070 - 400682..401863 (+) 1182 Protein_359 condensation domain-containing protein -

Sequence


Protein


Download         Length: 46 a.a.        Molecular weight: 5340.26 Da        Isoelectric Point: 10.1700

>NTDB_id=808815 P4829_RS01990 WP_231104944.1 400596..400736(+) (comS) [Bacillus atrophaeus strain MBLB1156]
MNRFSKRLIKSIILYPRPSEGCISSTSLDKQAQATTSLLYFCWKEK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=808815 P4829_RS01990 WP_231104944.1 400596..400736(+) (comS) [Bacillus atrophaeus strain MBLB1156]
TTGAACCGATTCAGCAAGCGCCTTATCAAGAGCATTATCCTGTATCCTCGGCCCAGCGAAGGATGTATATCCTCAACCAG
CTTGGACAAACAAGCACAAGCTACAACGTCCCTGCTGTACTTCTGCTGGAAGGAGAAGTAG

Domains


Predicted by InterproScan.

(1-44)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

78.261

100

0.783