Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   P3T49_RS04785 Genome accession   NZ_CP120723
Coordinates   955212..956003 (+) Length   263 a.a.
NCBI ID   WP_004430590.1    Uniprot ID   -
Organism   Bacillus atrophaeus strain NX-12     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 950212..961003
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P3T49_RS04755 - 951013..952068 (+) 1056 WP_390841146.1 FecCD family ABC transporter permease -
  P3T49_RS04760 - 952186..953067 (+) 882 WP_277714462.1 PhzF family phenazine biosynthesis isomerase -
  P3T49_RS04765 - 953148..953732 (+) 585 WP_061573406.1 nitroreductase family protein -
  P3T49_RS04770 - 953772..953963 (-) 192 WP_004430587.1 YfhD family protein -
  P3T49_RS04775 - 954041..954151 (-) 111 WP_003223230.1 YfhE family protein -
  P3T49_RS04780 - 954210..955121 (-) 912 WP_277714463.1 TIGR01777 family oxidoreductase -
  P3T49_RS04785 recX 955212..956003 (+) 792 WP_004430590.1 recombination regulator RecX Regulator
  P3T49_RS04790 - 956011..956337 (+) 327 WP_277714464.1 YfhH family protein -
  P3T49_RS04795 - 956472..957671 (+) 1200 WP_010788006.1 MFS transporter -
  P3T49_RS04800 - 957712..957864 (-) 153 WP_004430596.1 small, acid-soluble spore protein K -
  P3T49_RS04805 - 957982..958251 (+) 270 WP_004430597.1 YfhJ family protein -
  P3T49_RS04810 - 958379..958915 (+) 537 WP_010788007.1 SH3 domain-containing protein -
  P3T49_RS04815 - 959056..959403 (+) 348 WP_277714465.1 SdpI family protein -
  P3T49_RS04820 - 959390..960256 (+) 867 WP_277714466.1 alpha/beta fold hydrolase -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30952.20 Da        Isoelectric Point: 7.4549

>NTDB_id=808337 P3T49_RS04785 WP_004430590.1 955212..956003(+) (recX) [Bacillus atrophaeus strain NX-12]
MPFITKITTQKKTTERFNIFLDNKYAFSVDADVLVKFDLKKGKELDDLDIVEIQYGDEVKKGFNRALEFLSYRMRSTKEV
TDHLKKKEISDPAITEIIHKLNDYRYLNDKEFAEAYASTHKKTNGKGPDVLYKELRSKGIDDDTIKETLSTFSFEEQTEE
ALKHIGKILKKEKKLSTKEIKQRAQMLLQRKGFSFDVITAALEQTEYANDEDTEREALRQHAEKALRKYRYDGSYESKMK
VKQYLFRKGFSLDMIDQFLQEEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=808337 P3T49_RS04785 WP_004430590.1 955212..956003(+) (recX) [Bacillus atrophaeus strain NX-12]
ATGCCGTTTATCACGAAAATCACAACGCAGAAAAAAACGACCGAGCGCTTTAACATTTTTCTCGATAATAAATATGCTTT
CAGTGTGGATGCGGACGTACTCGTCAAATTCGACCTGAAAAAAGGAAAAGAACTCGACGACCTTGATATCGTTGAAATTC
AATACGGGGATGAAGTAAAGAAAGGCTTTAACCGGGCGCTTGAATTTTTATCATACCGGATGCGTTCAACAAAAGAGGTA
ACGGACCATTTAAAGAAGAAAGAAATTTCAGATCCGGCCATTACAGAAATCATCCATAAGCTGAATGATTATCGCTATCT
GAATGATAAAGAGTTCGCAGAAGCTTATGCGAGCACACATAAGAAAACAAATGGAAAGGGACCGGACGTTCTTTATAAAG
AGTTAAGGTCAAAGGGGATCGACGATGATACGATCAAAGAGACATTGAGCACATTTTCTTTTGAGGAACAGACAGAAGAG
GCGCTGAAGCATATCGGAAAAATCCTGAAAAAAGAAAAAAAGCTCTCTACAAAAGAAATCAAGCAGCGAGCGCAAATGCT
TTTGCAGCGTAAGGGCTTCTCCTTCGACGTCATCACAGCGGCGCTTGAGCAGACCGAGTATGCAAACGATGAAGATACAG
AAAGGGAAGCGTTACGGCAGCACGCTGAAAAGGCGCTAAGAAAATACCGATATGACGGCTCCTACGAGAGCAAGATGAAG
GTAAAACAATATTTATTCAGAAAAGGATTCTCACTGGATATGATTGACCAATTTCTGCAGGAAGAGGAGTAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-206)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

82.89

100

0.829