Detailed information NTG0808307

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: P6988_RS05465
• Genome accession: NZ_CP120719
• Coordinates: 1140102..1143488 (-)
• Length: 1128 a.a.
• NCBI ID: WP_277684738.1
• Uniprot ID: -
• Organism: Vibrio coralliilyticus strain Rb102
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 1135102..1148488

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P6988_RS05450 (P6988_05450)	-	1135548..1136573 (-)	1026	WP_006958094.1	ABC transporter permease	-
P6988_RS05455 (P6988_05455)	-	1136576..1137562 (-)	987	WP_006958093.1	ABC transporter permease	-
P6988_RS05460 (P6988_05460)	-	1137733..1139415 (-)	1683	WP_277684737.1	ABC transporter substrate-binding protein	-
P6988_RS05465 (P6988_05465)	chiS	1140102..1143488 (-)	3387	WP_277684738.1	response regulator	Regulator
P6988_RS05470 (P6988_05470)	rsmC	1143683..1144705 (-)	1023	WP_277684739.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
P6988_RS05475 (P6988_05475)	-	1144784..1145869 (-)	1086	WP_038509720.1	AI-2E family transporter	-
P6988_RS05480 (P6988_05480)	hemL	1146133..1147425 (-)	1293	WP_171339904.1	glutamate-1-semialdehyde 2,1-aminomutase	-
P6988_RS05485 (P6988_05485)	erpA	1147681..1148022 (+)	342	WP_019276906.1	iron-sulfur cluster insertion protein ErpA	-

Sequence

Protein

• Length: 1128 a.a.
• Molecular weight: 127222.04 Da
• Isoelectric Point: 6.1310

>NTDB_id=808307 P6988_RS05465 WP_277684738.1 1140102..1143488(-) (chiS) [Vibrio coralliilyticus strain Rb102]
MFKLYRKQRFKRLQHTLMLAFLVLSITPLTIIAIFFLQSHTKDLQEQSTSHLISVRDSKQQQVTDYMYAKESEVMGFVRS
ELAYASGGRFYGLVNAFRSLGLDMAQAREYAQRRYIPGSGDQIKTSILPQSNVYTGTERYRLLHKRYHRAYLELLKRSDF
DDALLVDLEGNVTYSIFKHDNYGTNLLTGRFRDTNLGRTFHKLKTQVTEKRKSNEDYTPVIISDFEMDRGKPVAWLGAPI
VQQGYLHSYAMFRLPNNGITKLIADTNNASAMKTLLVGADHKSRTMAYEQKDIDKSREVVDLALEGKTDVGTYTNTIGEA
TIAAYSPISFKGVDWAIVVEVPEKEAFARVHQLETLFVFAMLCAIVLVVAASHYLSNFITAPLLKLTWAAEKVSAGDLDT
DIINTERKDEIGRLAISFERMQRSIRDKIQLIKQQNEELESNLKLIQKQNDELQLANKLKDEFLATTSHELRTPLHGMVG
IAEALISGANGPITADHKYQLDIIISSGQRLATLVDDLLDYHKMRYGNLDIETRAVDISGATRLVLELSTHLVGNKPIRI
INQVPNDPLWVCADPQRLEQVLYNLVGNAIKYTSEGKIVISATQVDDNIRVQVVDTGQGIPAEQLEHIFEPLIQAGSDSS
RYRQGAGLGLSISRQLIDLMQGTLYVSSQPMVGTTFSFTLPIASTEQIGLASHIEGTHFIAPENNDLEIIEGSNLPENPD
GPLLLVVDDEPVNLRVLDSFLRLEGYRVRTAKNGEEAVESVVHEKPELMLLDIMMPGMSGYQVCEVLRKDYDHAQLPVIM
LTALNQPDDRVRGFEAGANDYLSKPFNKQELAARITAHLTASKAEQRRIENQQLQTELKQRAMVEASLLETQGRLLEQLE
SAPEAIICVREDNKIRFTNDAASRLFKRTTEQLRRSNADELIAPKFLDVEQPHYCGVIDVYVEDVRQHLSADILKLPEGS
GLKSMYIFNVGGSVNAARINNLETAVEALSSYAFEGDKAKLQELKELGGEFTRLADRATTDSKSKQEVMREVLVDAMTSA
LTYWESVTGQSKFAFAEQSGLWRVYLDRSTLQTRTLDKYLRVETLPKTPRWRTVLSSLEYILEHCKEMSPERTHIESLRD
KLQHLLTS

Nucleotide

• Length: 3387 bp

>NTDB_id=808307 P6988_RS05465 WP_277684738.1 1140102..1143488(-) (chiS) [Vibrio coralliilyticus strain Rb102]
ATGTTTAAGTTGTACCGAAAACAAAGATTTAAGCGCCTGCAACATACTTTAATGCTGGCATTTCTTGTATTGAGCATTAC
ACCGCTCACGATCATCGCGATTTTTTTCCTCCAATCTCATACCAAAGATTTGCAGGAGCAAAGTACTTCGCACTTAATCT
CCGTACGAGACAGTAAGCAGCAACAAGTCACTGACTACATGTATGCCAAAGAATCGGAAGTCATGGGCTTTGTCCGCTCT
GAACTGGCTTATGCCAGTGGCGGGCGTTTCTACGGCTTGGTCAATGCATTTCGCAGCTTAGGGCTAGATATGGCTCAGGC
ACGCGAGTACGCTCAGCGGCGTTACATTCCTGGCTCAGGCGATCAGATCAAAACCTCAATACTTCCTCAGTCCAATGTTT
ATACCGGCACTGAGCGCTATCGACTGCTGCATAAGCGCTATCACAGAGCCTATCTGGAACTGCTCAAACGCTCTGACTTT
GACGACGCTTTGCTGGTTGATTTAGAAGGTAACGTCACCTACTCCATCTTTAAACACGACAACTACGGCACCAATCTGCT
TACTGGCCGCTTTCGTGATACCAATCTAGGCAGAACCTTCCACAAGCTGAAAACTCAGGTTACTGAAAAGCGTAAATCCA
ATGAAGATTACACACCGGTGATCATCTCAGACTTTGAGATGGACAGAGGTAAACCTGTCGCGTGGCTCGGCGCTCCCATC
GTTCAGCAAGGTTATCTCCACAGCTACGCCATGTTCCGTTTACCAAACAATGGCATCACTAAGCTAATAGCTGATACCAA
CAACGCTTCAGCAATGAAAACTTTACTGGTAGGTGCTGACCATAAATCAAGAACCATGGCGTATGAGCAAAAAGACATCG
ATAAGAGCCGCGAAGTTGTTGATTTAGCATTGGAAGGAAAAACCGATGTTGGAACATACACAAACACGATAGGAGAGGCG
ACCATCGCGGCTTACAGTCCGATTTCGTTTAAAGGTGTCGACTGGGCCATTGTGGTAGAAGTGCCAGAAAAAGAAGCTTT
TGCACGCGTCCACCAACTCGAAACTCTTTTCGTATTTGCCATGCTATGTGCAATTGTACTGGTGGTTGCCGCGTCCCATT
ACTTGTCTAATTTTATTACCGCGCCTTTGTTGAAGCTGACGTGGGCGGCAGAAAAAGTCTCGGCTGGCGATCTCGATACA
GACATCATCAATACAGAGCGAAAAGATGAGATAGGCCGACTGGCCATCAGCTTTGAGCGCATGCAACGCTCCATTCGCGA
CAAAATACAGCTCATAAAACAGCAAAATGAAGAGCTGGAGAGCAACCTAAAGCTGATCCAAAAGCAAAATGACGAGCTGC
AATTGGCGAACAAACTCAAAGATGAGTTCCTCGCCACCACCTCTCATGAATTGCGAACTCCACTCCATGGCATGGTAGGT
ATCGCAGAAGCGCTAATCTCCGGCGCCAATGGGCCAATTACCGCGGATCACAAGTACCAGCTCGATATCATCATCAGTAG
CGGCCAGCGCTTGGCCACCTTGGTTGATGACCTGCTTGATTACCACAAAATGCGTTACGGTAATCTCGATATCGAAACCC
GAGCAGTGGACATCTCCGGTGCAACACGCTTGGTGCTCGAACTGTCGACTCACTTAGTGGGTAACAAACCCATTCGCATC
ATTAATCAGGTTCCTAACGATCCGCTATGGGTATGCGCCGACCCTCAACGCTTAGAGCAAGTGCTATACAACCTCGTTGG
TAACGCCATCAAATACACCAGTGAAGGAAAAATCGTTATTTCCGCCACACAGGTCGATGATAACATCCGCGTTCAGGTGG
TAGATACTGGTCAGGGGATCCCTGCTGAGCAGCTTGAACACATTTTTGAACCCTTGATTCAGGCTGGCAGTGATAGTAGC
CGTTATCGCCAAGGGGCCGGCCTTGGTCTATCTATCAGCCGTCAGTTGATTGATTTGATGCAAGGCACGCTCTACGTCAG
CAGCCAACCTATGGTTGGTACGACCTTTAGTTTCACTTTGCCAATCGCCTCAACCGAGCAGATAGGCCTCGCAAGCCATA
TCGAAGGCACGCATTTCATTGCTCCAGAAAACAATGACCTAGAAATAATCGAAGGCTCAAATTTACCGGAAAATCCTGAC
GGGCCATTGCTGTTAGTGGTCGATGATGAACCGGTCAATCTGCGTGTCTTAGACAGCTTCCTTCGCCTTGAAGGCTACCG
AGTACGCACCGCGAAAAATGGCGAAGAAGCCGTTGAATCCGTTGTTCATGAAAAACCAGAACTGATGCTACTCGATATCA
TGATGCCGGGAATGAGCGGCTATCAGGTGTGTGAAGTGTTGCGTAAAGACTATGATCATGCTCAGCTCCCCGTCATCATG
CTCACAGCATTGAATCAGCCCGATGACAGAGTTCGAGGTTTCGAAGCCGGAGCCAATGACTACTTATCAAAACCTTTTAA
CAAACAAGAGCTCGCCGCACGGATTACAGCACATTTGACCGCGAGCAAAGCTGAACAGCGTCGGATTGAAAACCAGCAAC
TACAAACTGAGCTTAAGCAGCGCGCCATGGTTGAAGCCAGTCTATTGGAAACTCAGGGGCGTCTACTAGAGCAATTGGAA
TCAGCGCCAGAAGCGATTATCTGTGTACGTGAAGACAATAAAATCCGCTTCACCAATGATGCCGCCTCTCGTCTATTTAA
ACGCACCACAGAACAATTACGCCGTTCCAATGCAGATGAGTTGATTGCACCAAAATTCCTTGACGTCGAACAACCGCACT
ACTGTGGCGTCATTGATGTTTATGTCGAAGATGTCCGCCAGCACTTGTCCGCAGACATTCTCAAACTTCCAGAAGGCTCT
GGACTCAAATCCATGTACATCTTTAACGTGGGGGGCAGTGTCAATGCCGCGCGGATCAATAACCTAGAAACCGCGGTTGA
AGCCCTTTCCAGCTACGCGTTTGAAGGGGATAAGGCCAAACTGCAAGAGTTAAAAGAGTTAGGTGGAGAGTTTACGCGGT
TAGCCGATCGGGCTACCACTGACAGCAAATCCAAGCAAGAAGTCATGCGTGAAGTCTTAGTCGATGCAATGACAAGTGCG
CTAACTTATTGGGAAAGCGTTACTGGTCAAAGCAAGTTTGCTTTCGCAGAGCAAAGCGGGTTATGGCGTGTGTACCTCGA
CCGTAGCACCTTACAGACTCGGACTCTGGACAAATACCTGCGAGTCGAAACGTTACCAAAAACACCGCGCTGGCGAACGG
TACTGAGTTCTCTTGAGTACATCCTTGAACACTGTAAAGAAATGAGCCCAGAGCGCACTCATATTGAGAGCCTTCGCGAT
AAGCTGCAACACCTCCTAACCAGCTAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (725-835)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-682)

• HAMP domain (HAMP) (375-427)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	79.167	100	0.792