Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   RND68_RS04890 Genome accession   NZ_CP134882
Coordinates   919770..920588 (+) Length   272 a.a.
NCBI ID   WP_001124422.1    Uniprot ID   P66002
Organism   Staphylococcus aureus strain 10-5-1     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 914770..925588
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RND68_RS04855 (RND68_04855) - 916280..916432 (+) 153 WP_001788502.1 hypothetical protein -
  RND68_RS04860 (RND68_04860) - 916503..916613 (+) 111 WP_000139423.1 hypothetical protein -
  RND68_RS04865 (RND68_04865) - 916615..916800 (+) 186 WP_001286805.1 hypothetical protein -
  RND68_RS04870 (RND68_04870) - 917126..917206 (-) 81 WP_100250272.1 hypothetical protein -
  RND68_RS04875 (RND68_04875) - 917553..917714 (+) 162 WP_001005407.1 SE1561 family protein -
  RND68_RS04880 (RND68_04880) - 917844..918359 (+) 516 WP_000163281.1 type 1 glutamine amidotransferase domain-containing protein -
  RND68_RS04885 (RND68_04885) sgtB 918700..919509 (+) 810 WP_000830380.1 monofunctional peptidoglycan glycosyltransferase SgtB -
  RND68_RS04890 (RND68_04890) recX 919770..920588 (+) 819 WP_001124422.1 recombination regulator RecX Regulator
  RND68_RS04895 (RND68_04895) - 920566..920880 (+) 315 WP_000435806.1 YfhH family protein -
  RND68_RS04900 (RND68_04900) - 920895..922412 (+) 1518 WP_000535849.1 ATP-binding cassette domain-containing protein -
  RND68_RS04905 (RND68_04905) - 922421..923257 (+) 837 WP_000886472.1 hypothetical protein -
  RND68_RS04910 (RND68_04910) - 923518..924495 (-) 978 WP_000379091.1 metal-dependent hydrolase -

Sequence

Protein


Download         Length: 272 a.a.        Molecular weight: 32259.10 Da        Isoelectric Point: 5.9211

>NTDB_id=808294 RND68_RS04890 WP_001124422.1 919770..920588(+) (recX) [Staphylococcus aureus strain 10-5-1]
MPKITKIEVQKKNKERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKKRTEKEV
IQYLQKEEISEQAISEVIEYCYREKLIDHQDYAESLKNTMIRTTDKGPKIYQQKLYQLGIEPNIIEMFTELYREQQELDD
IIQIAEKISKTKKGPQNKVKEKVMQSLIQKGFEMETIHAVLNEMDFTQDEAVLDDLLQRDLEKIYNKNRKKYTQQKLISK
TIEGLMRKGYKYDKIKAKLEESGIADGTEEIE

Nucleotide


Download         Length: 819 bp        

>NTDB_id=808294 RND68_RS04890 WP_001124422.1 919770..920588(+) (recX) [Staphylococcus aureus strain 10-5-1]
GTGCCGAAGATTACTAAAATAGAAGTTCAAAAGAAAAACAAAGAACGTTTTAATCTTTTTTTAGATGAACAATTTGAAAT
GGGTATAGATATCGATACATTAGTCAAATTTAATTTAAAAAAAGGGCAACAACTTGAAGCTGCTGACATGGCAGAGATTC
AAAAGTATGATCATTATCGCATAGGTTTAAATAAAGCAATCCAATATTTATCATATAAAAAGAGAACTGAAAAAGAAGTT
ATACAATATTTACAAAAAGAAGAGATATCAGAGCAAGCGATTTCTGAAGTGATTGAATATTGTTATCGCGAAAAGTTAAT
CGACCATCAAGATTATGCGGAAAGTTTAAAAAATACAATGATTCGCACGACAGATAAAGGACCTAAAATTTATCAACAAA
AACTTTATCAACTTGGTATAGAACCAAATATCATTGAAATGTTTACAGAACTTTATAGAGAACAACAGGAACTTGATGAT
ATTATCCAAATTGCTGAAAAAATATCTAAAACAAAAAAGGGGCCACAAAATAAGGTTAAAGAAAAAGTAATGCAATCTTT
AATTCAAAAAGGGTTTGAAATGGAAACCATTCATGCTGTATTGAATGAAATGGATTTTACACAAGATGAAGCGGTTTTAG
ACGATTTATTACAACGAGATTTAGAAAAAATTTATAATAAAAATCGAAAGAAGTACACGCAACAAAAATTAATTTCAAAA
ACTATCGAAGGCCTTATGAGAAAAGGATATAAATATGATAAAATTAAAGCTAAATTAGAAGAAAGTGGTATTGCCGATGG
AACAGAAGAAATTGAGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(84-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P66002

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

99.632

100

0.996