Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   P0M29_RS19280 Genome accession   NZ_CP120711
Coordinates   3742728..3742919 (+) Length   63 a.a.
NCBI ID   WP_003155061.1    Uniprot ID   A0AAE2TKK9
Organism   Bacillus velezensis strain 12Y     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3737728..3747919
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P0M29_RS19250 (P0M29_19250) argF 3738579..3739550 (+) 972 WP_029973149.1 ornithine carbamoyltransferase -
  P0M29_RS19255 (P0M29_19255) - 3739626..3739805 (+) 180 WP_003155070.1 YjzC family protein -
  P0M29_RS19260 (P0M29_19260) - 3739842..3740027 (-) 186 WP_007409129.1 YjzD family protein -
  P0M29_RS19265 (P0M29_19265) - 3740288..3741022 (+) 735 WP_022553564.1 hypothetical protein -
  P0M29_RS19270 (P0M29_19270) - 3741105..3741671 (+) 567 WP_017417444.1 hypothetical protein -
  P0M29_RS19275 (P0M29_19275) med 3741762..3742715 (+) 954 WP_014417407.1 BMP family ABC transporter substrate-binding protein Regulator
  P0M29_RS19280 (P0M29_19280) comZ 3742728..3742919 (+) 192 WP_003155061.1 ComZ family protein Regulator
  P0M29_RS19285 (P0M29_19285) - 3742948..3743166 (-) 219 WP_007409123.1 hypothetical protein -
  P0M29_RS19290 (P0M29_19290) - 3743333..3744271 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  P0M29_RS19295 (P0M29_19295) fabF 3744294..3745532 (+) 1239 WP_025649581.1 beta-ketoacyl-ACP synthase II -
  P0M29_RS19300 (P0M29_19300) - 3745616..3746401 (+) 786 WP_012117278.1 DUF2268 domain-containing protein -
  P0M29_RS19305 (P0M29_19305) - 3746575..3747561 (+) 987 WP_025284553.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7203.33 Da        Isoelectric Point: 4.2259

>NTDB_id=808208 P0M29_RS19280 WP_003155061.1 3742728..3742919(+) (comZ) [Bacillus velezensis strain 12Y]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMDLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=808208 P0M29_RS19280 WP_003155061.1 3742728..3742919(+) (comZ) [Bacillus velezensis strain 12Y]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTATGGAAATGATTCAGCCGTTTATGGACCTGTTTACATCGGTCATGGCGGAAGCATATGAGCTTG
GCAGATCTGATGCCGGAGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

86.207

92.063

0.794