Detailed information    

insolico Bioinformatically predicted

Overview


Name   comS   Type   Regulator
Locus tag   P0M29_RS14810 Genome accession   NZ_CP120711
Coordinates   2901540..2901704 (+) Length   54 a.a.
NCBI ID   WP_269194677.1    Uniprot ID   -
Organism   Bacillus velezensis strain 12Y     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 2896540..2906704
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P0M29_RS14800 (P0M29_14800) - 2898447..2899883 (+) 1437 WP_230113408.1 condensation domain-containing protein -
  P0M29_RS14805 (P0M29_14805) - 2899838..2901475 (+) 1638 Protein_2878 non-ribosomal peptide synthetase -
  P0M29_RS14810 (P0M29_14810) comS 2901540..2901704 (+) 165 WP_269194677.1 competence protein ComS Regulator

Sequence


Protein


Download         Length: 54 a.a.        Molecular weight: 6211.19 Da        Isoelectric Point: 11.7559

>NTDB_id=808194 P0M29_RS14810 WP_269194677.1 2901540..2901704(+) (comS) [Bacillus velezensis strain 12Y]
MRARRSSSLNRSDKRLIRSIILFPQHSAGCISLISSDRPARATTSLLYFCWKDQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=808194 P0M29_RS14810 WP_269194677.1 2901540..2901704(+) (comS) [Bacillus velezensis strain 12Y]
ATGAGAGCGAGGAGGAGCAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGGAGCATTATCCTGTTTCCTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCCAGCACGAGCTACAACGTCCCTGCTGTACTTCTGCTGGAAGGATC
AGTAG

Domains


Predicted by InterproScan.

(9-52)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

58.696

85.185

0.5