Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   RNT94_RS06715 Genome accession   NZ_CP134803
Coordinates   1391486..1392226 (-) Length   246 a.a.
NCBI ID   WP_000216874.1    Uniprot ID   -
Organism   Staphylococcus aureus strain SA85_2     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1386486..1397226
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RNT94_RS06690 hemH 1387364..1388287 (-) 924 WP_000162876.1 ferrochelatase -
  RNT94_RS06695 hemE 1388344..1389381 (-) 1038 WP_000233540.1 uroporphyrinogen decarboxylase -
  RNT94_RS06700 - 1389371..1389457 (-) 87 WP_031875110.1 hypothetical protein -
  RNT94_RS06705 traP 1389643..1390146 (+) 504 WP_000737983.1 signal transduction protein TRAP -
  RNT94_RS06710 ecsB 1390270..1391493 (-) 1224 WP_001245751.1 ABC transporter permease EcsB -
  RNT94_RS06715 pptA 1391486..1392226 (-) 741 WP_000216874.1 ABC transporter ATP-binding protein EcsA Regulator
  RNT94_RS06720 - 1392360..1392782 (+) 423 WP_000004984.1 HIT family protein -
  RNT94_RS06725 - 1392924..1393289 (+) 366 WP_000648118.1 YtxH domain-containing protein -
  RNT94_RS06730 - 1394021..1394578 (+) 558 WP_000477959.1 DUF3267 domain-containing protein -
  RNT94_RS06735 - 1394783..1395745 (+) 963 WP_000782119.1 foldase protein PrsA -
  RNT94_RS06740 yhaM 1395866..1396807 (-) 942 WP_001244175.1 3'-5' exoribonuclease YhaM -

Sequence

Protein


Download         Length: 246 a.a.        Molecular weight: 27687.02 Da        Isoelectric Point: 4.6672

>NTDB_id=808085 RNT94_RS06715 WP_000216874.1 1391486..1392226(-) (pptA) [Staphylococcus aureus strain SA85_2]
MTVKVEQLTGGYGKRPVIKDINFELNKGEIVGLIGLNGAGKSTTIKHMLGLLTPMEGSLSISDININDDIEAYRRKLSYI
PESPVIYEELTLEEHIEMTAMAYDIDRDEAMNRAMPLLKTFRLENELKVFPSHFSKGMKQKVMIICAFIVNPELYIIDEP
FLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDEGEVVAFGDLEALRQQTGLHNQTLDDIYIHVTQ
GGDVHA

Nucleotide


Download         Length: 741 bp        

>NTDB_id=808085 RNT94_RS06715 WP_000216874.1 1391486..1392226(-) (pptA) [Staphylococcus aureus strain SA85_2]
ATGACAGTTAAAGTAGAACAGCTTACAGGTGGATATGGAAAACGCCCTGTAATTAAAGATATAAATTTTGAATTAAACAA
AGGCGAAATCGTTGGACTTATTGGCCTTAATGGCGCTGGTAAGAGTACAACGATTAAACATATGCTAGGATTGCTTACAC
CTATGGAAGGATCTCTATCAATTTCAGACATCAACATTAATGATGACATAGAGGCTTATAGAAGAAAGTTATCTTATATT
CCGGAATCACCGGTTATTTATGAAGAACTCACATTAGAGGAACACATTGAGATGACAGCAATGGCATATGATATTGATCG
TGATGAAGCGATGAATCGAGCAATGCCATTATTAAAGACATTCCGTTTAGAAAATGAATTGAAAGTTTTTCCGAGTCATT
TTTCTAAGGGGATGAAACAAAAAGTCATGATTATTTGTGCGTTTATCGTTAATCCCGAATTGTATATTATAGACGAACCA
TTCCTTGGTCTAGATCCATTAGGAATTCAATCCATGTTAGATTTAATGGTTGAAAAGAAAAACGAAGGTAGAACCGTTCT
AATGAGTACACATATTTTAGCGACAGCTGAACGTTATTGTGATCGTTTTATCATACTAGACGAAGGTGAAGTCGTTGCAT
TTGGAGATTTAGAAGCATTGAGACAACAAACTGGCTTACATAATCAAACATTAGACGATATATATATTCATGTGACGCAA
GGTGGAGATGTACATGCGTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-161)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

57.322

97.154

0.557
  pptA Streptococcus thermophilus LMD-9

56.067

97.154

0.545