Detailed information    

insolico Bioinformatically predicted

Overview

Name   htrA   Type   Regulator
Locus tag   RNT94_RS06180 Genome accession   NZ_CP134803
Coordinates   1287301..1288575 (+) Length   424 a.a.
NCBI ID   WP_311892082.1    Uniprot ID   -
Organism   Staphylococcus aureus strain SA85_2     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1282301..1293575
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RNT94_RS06160 - 1283625..1283720 (+) 96 WP_014937038.1 hypothetical protein -
  RNT94_RS06165 - 1283681..1284811 (-) 1131 WP_000721712.1 HAD family hydrolase -
  RNT94_RS06170 nagE 1284918..1286384 (-) 1467 WP_000276349.1 N-acetylglucosamine-specific PTS transporter subunit IIBC -
  RNT94_RS06175 - 1286512..1287129 (-) 618 WP_000287588.1 1-acyl-sn-glycerol-3-phosphate acyltransferase -
  RNT94_RS06180 htrA 1287301..1288575 (+) 1275 WP_311892082.1 trypsin-like peptidase domain-containing protein Regulator
  RNT94_RS06185 tyrS 1288669..1289931 (-) 1263 WP_000186029.1 tyrosine--tRNA ligase -
  RNT94_RS06190 - 1290312..1291217 (+) 906 WP_000184373.1 transglycosylase domain-containing protein -
  RNT94_RS06195 - 1291197..1291289 (-) 93 WP_014937039.1 hypothetical protein -

Sequence

Protein


Download         Length: 424 a.a.        Molecular weight: 45790.93 Da        Isoelectric Point: 9.8964

>NTDB_id=808083 RNT94_RS06180 WP_311892082.1 1287301..1288575(+) (htrA) [Staphylococcus aureus strain SA85_2]
MSDFNHTDHSTTNHSQTPRYRRPKFPWFKTVIVALIAGIIGALLVLGIGKVLNSTILNKDGSTVQTTNNKGGNQLDGQSK
KFGTVHEMIKSVSPTIVGVINMQKASSVDDLLKGKSSKPSEAGVGSGVIYQINNNSAYIVTNNHVIDNANEIRVQLHNKK
QVKAKLVGKDAVTDIAVLKIENTKGIKAIQFANSSKVQTGDSVFAMGNPLGLQFANSVTSGIISASERTIDAETTGGNTK
VSVLQTDAAINPGNSGGALVDINGNLVGINSMKIAATQVEGIGFAIPSNEVKVTIEQLVKHGKIDRPSIGIGLINLKDIP
EEEREQLHTDSEDGIYVAKADSDIDLKKGDIITEIDGKKIKDDVDLRSYLYENKKPGESVTVTVIRDGKTKEVKVKLKQQ
KEQPKRQSRSERQSPGQGDRDFFR

Nucleotide


Download         Length: 1275 bp        

>NTDB_id=808083 RNT94_RS06180 WP_311892082.1 1287301..1288575(+) (htrA) [Staphylococcus aureus strain SA85_2]
ATGTCAGATTTTAATCATACAGATCATTCTACAACAAACCATAGCCAAACACCTAGATACAGAAGGCCTAAATTTCCATG
GTTTAAAACAGTCATCGTTGCATTGATTGCTGGAATCATTGGTGCACTTCTAGTACTTGGTATAGGCAAAGTATTAAATA
GTACAATTTTAAATAAAGATGGTTCAACTGTCCAGACAACAAATAATAAAGGTGGCAATCAATTAGACGGTCAAAGCAAG
AAATTCGGTACCGTTCATGAAATGATAAAATCTGTCTCCCCTACAATTGTTGGAGTTATTAACATGCAAAAAGCATCAAG
TGTAGACGACTTATTAAAAGGCAAATCATCTAAACCATCTGAAGCCGGAGTAGGTTCAGGTGTTATCTATCAAATAAACA
ACAATTCAGCTTATATCGTTACAAACAATCATGTTATTGATAACGCAAATGAAATTAGAGTCCAATTACATAATAAAAAA
CAAGTTAAAGCGAAATTAGTTGGTAAAGATGCAGTAACTGATATTGCTGTACTTAAAATTGAAAATACAAAAGGTATTAA
AGCGATTCAATTCGCCAACTCTTCAAAAGTACAAACTGGCGATAGCGTATTCGCAATGGGTAACCCATTAGGATTACAAT
TTGCTAACTCTGTAACATCTGGTATCATTTCAGCAAGTGAACGTACTATTGACGCAGAGACAACTGGTGGTAATACAAAA
GTCAGCGTTCTTCAAACAGATGCTGCTATTAACCCAGGTAACTCAGGTGGCGCATTAGTAGATATTAATGGTAATTTAGT
TGGTATTAACTCAATGAAAATTGCTGCGACACAAGTTGAAGGTATTGGGTTTGCTATTCCAAGTAATGAAGTTAAAGTAA
CAATTGAACAACTTGTAAAACATGGTAAAATAGACCGCCCTTCGATTGGTATTGGTTTAATTAATTTGAAAGATATACCT
GAAGAAGAGCGCGAGCAACTTCATACTGATAGCGAAGACGGTATTTATGTCGCAAAAGCTGATAGTGATATTGATCTTAA
AAAAGGTGATATTATTACAGAAATTGATGGCAAGAAAATTAAAGATGATGTTGATTTAAGAAGCTATTTATATGAAAATA
AAAAACCTGGTGAATCAGTCACTGTTACCGTTATCCGTGATGGTAAAACAAAAGAAGTTAAAGTGAAATTAAAACAACAA
AAAGAACAACCAAAACGTCAAAGCCGATCAGAACGTCAATCACCTGGCCAAGGCGATAGAGATTTCTTTAGATAA

Domains

Predicted by InterProScan.

PDZ domain (PDZ_2)

(307-397)

Trypsin-like peptidase domain (Trypsin_2)

(125-269)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

38.806

94.811

0.368