Detailed information NTG0807921

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: RI132_RS13050
• Genome accession: NZ_CP134783
• Coordinates: 2813639..2816461 (+)
• Length: 940 a.a.
• NCBI ID: WP_311888102.1
• Uniprot ID: -
• Organism: Vibrio vulnificus strain GCU-01
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2808639..2821461

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RI132_RS13030 (RI132_13030)	csrD	2808799..2810796 (-)	1998	WP_045596393.1	RNase E specificity factor CsrD	-
RI132_RS13035 (RI132_13035)	ssb	2810949..2811488 (-)	540	WP_011079389.1	single-stranded DNA-binding protein	Machinery gene
RI132_RS13040 (RI132_13040)	qstR	2811788..2812435 (+)	648	WP_045596394.1	response regulator transcription factor	Regulator
RI132_RS13045 (RI132_13045)	galU	2812625..2813497 (+)	873	WP_011079387.1	UTP--glucose-1-phosphate uridylyltransferase GalU	-
RI132_RS13050 (RI132_13050)	uvrA	2813639..2816461 (+)	2823	WP_311888102.1	excinuclease ABC subunit UvrA	Machinery gene
RI132_RS13055 (RI132_13055)	-	2816528..2818291 (+)	1764	WP_011151255.1	PglL family O-oligosaccharyltransferase	-
RI132_RS13060 (RI132_13060)	-	2818356..2819477 (-)	1122	WP_045620599.1	alanine--glyoxylate aminotransferase family protein	-
RI132_RS13065 (RI132_13065)	lysC	2819992..2821341 (+)	1350	WP_039554802.1	lysine-sensitive aspartokinase 3	-

Sequence

Protein

• Length: 940 a.a.
• Molecular weight: 103954.33 Da
• Isoelectric Point: 6.4801

>NTDB_id=807921 RI132_RS13050 WP_311888102.1 2813639..2816461(+) (uvrA) [Vibrio vulnificus strain GCU-01]
MDKIEVRGARTHNLKNVNLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLS
PAISIEQKSTSHNPRSTVGTITEVYDYLRLLYARVGEPRCPEHQVPLAAQTISQMVDKVLELPEGAKMMLLAPIVKERKG
EHVKTLENLAAQGFIRARIDGETCDLTDPPTLELHKKHTIEVVVDRFKVRSDLQQRLAESFETALELSGGIAVIAPMEGD
GEESVFSANFACPHCGYSMQELEPRLFSFNNPAGACGTCDGLGVQQYFDPDRVIQDANLSLAQGAIRGWDQKNYYYFQML
TSLAEHYDFDLHVPFNSLSKRIQEVILKGSGRTEIEFKYINDRGDIRLKRHPFEGILNTLERRYRDTESNSVREELVKYI
STKPCASCGGTRLRLEARNVFINDTTLPQIVELSIADALTFFATLKLDGQRAQIAEKVMKEINDRLQFLVNVGLNYLNLS
RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLKTLTHLRDLGNTVLVVEHDEDAIRCADHVIDIG
PGAGVHGGQVVAEGTMAEILANPDSLTGQYLSGAKQIIVPTQRTPRDKNKTVELIGASGNNLKDVNLSVPVGLFSCITGV
SGSGKSTLINDTFFKIAHTQLNGATTAQPAPYKSIKGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFSGTQES
RSRGYKPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDVCKGKRYNRETLEVHYKGKSIDEVLEMTVEDAHEFFA
PVPVIARKLQTLMDVGLSYIRLGQAATTLSGGEAQRVKLARELSKRDTGKTLYILDEPTTGLHFHDIQQLLTVLHRLRDH
GNTVVVIEHNLDVIKTADWIIDLGPEGGQGGGEIIAQGTPEDVAQIEGSHTARFLKPMLK

Nucleotide

• Length: 2823 bp

>NTDB_id=807921 RI132_RS13050 WP_311888102.1 2813639..2816461(+) (uvrA) [Vibrio vulnificus strain GCU-01]
ATGGACAAGATAGAAGTTCGCGGAGCACGTACCCATAATCTCAAAAATGTTAATCTCACTATCCCACGAGATAAGTTGAT
CGTCATTACTGGCTTATCGGGTTCAGGGAAATCTTCTTTGGCCTTTGATACCCTTTACGCTGAAGGTCAACGACGTTATG
TAGAATCCCTGTCAGCCTACGCTCGCCAGTTTCTCTCTTTGATGGAAAAGCCCGATGTTGACCACATTGAAGGCCTCTCG
CCAGCAATTTCTATCGAGCAGAAATCTACCTCACACAACCCGCGTTCAACCGTAGGGACCATCACAGAAGTGTATGACTA
CCTTCGCCTACTGTATGCCCGCGTTGGTGAGCCTCGCTGTCCTGAACATCAAGTCCCTTTAGCCGCTCAAACCATTAGCC
AAATGGTCGACAAAGTTCTGGAGCTGCCTGAAGGTGCCAAAATGATGTTGCTCGCCCCCATCGTAAAAGAGCGCAAAGGC
GAACACGTTAAAACATTAGAGAACCTTGCTGCTCAAGGTTTTATCCGTGCTCGTATTGACGGAGAGACCTGTGACCTCAC
CGATCCACCAACGCTAGAGTTACACAAAAAGCACACCATTGAAGTGGTGGTTGACCGCTTTAAAGTGCGTAGCGATTTAC
AACAAAGACTCGCAGAATCCTTTGAAACGGCACTGGAACTCTCAGGCGGCATCGCTGTGATTGCCCCTATGGAGGGTGAC
GGTGAAGAGAGCGTTTTTTCCGCCAACTTTGCGTGTCCCCACTGTGGTTATAGTATGCAAGAGCTTGAGCCACGTTTGTT
CTCGTTCAATAACCCAGCCGGTGCGTGTGGTACTTGTGATGGCCTCGGGGTACAACAATATTTTGATCCTGACCGAGTGA
TTCAAGATGCCAATTTAAGTCTTGCGCAAGGGGCGATTCGTGGTTGGGATCAGAAAAACTATTACTATTTCCAAATGCTC
ACATCGCTGGCTGAGCATTACGATTTCGATTTACATGTCCCTTTTAACTCGCTTTCAAAACGCATCCAAGAAGTGATCTT
AAAAGGCTCTGGGCGCACTGAAATCGAATTTAAGTACATCAACGATCGAGGCGATATTCGTCTAAAACGTCATCCATTTG
AAGGCATTCTCAATACACTCGAACGCCGTTATCGCGACACAGAATCTAACTCGGTACGAGAGGAGTTGGTAAAATATATC
TCCACCAAACCTTGCGCCAGTTGTGGCGGAACACGTCTGCGCCTAGAAGCTCGCAATGTGTTTATTAATGACACGACATT
GCCGCAAATCGTCGAGTTGAGTATCGCTGATGCATTGACCTTTTTCGCCACCTTAAAACTTGACGGGCAGCGAGCTCAAA
TTGCTGAGAAGGTCATGAAAGAGATCAACGATCGACTGCAGTTTTTAGTCAATGTTGGCCTCAATTATTTGAACTTGTCT
CGCAGCGCTGAAACCTTGTCTGGTGGCGAAGCACAGCGTATTCGTCTGGCTAGTCAGATCGGTGCCGGTTTGGTCGGCGT
GATGTACGTGCTCGATGAACCATCAATAGGCCTTCACCAGCGTGACAATGAGCGCTTACTCAAAACACTGACGCACTTAC
GCGATCTCGGCAATACCGTATTAGTCGTAGAGCATGATGAAGATGCGATTCGTTGTGCCGACCATGTGATTGACATTGGC
CCTGGTGCTGGCGTACATGGTGGCCAAGTGGTTGCCGAAGGAACAATGGCCGAGATTCTCGCCAATCCAGATTCCTTGAC
CGGACAATACTTAAGCGGTGCCAAGCAGATTATTGTGCCGACCCAACGCACACCAAGAGATAAGAACAAAACGGTTGAAC
TCATTGGAGCCAGTGGCAACAACCTTAAAGACGTCAATCTTTCGGTGCCTGTCGGGCTATTCAGTTGTATCACCGGGGTT
TCTGGTTCAGGTAAATCAACACTGATTAACGACACCTTCTTCAAAATTGCGCATACCCAACTCAATGGAGCGACCACAGC
TCAACCAGCGCCTTATAAGTCTATTAAAGGCTTAGAGCATTTTGATAAGGTCATCGATATCGACCAGAGCCCCATCGGTC
GCACACCGCGTTCGAATCCAGCAACCTATACGGGGATTTTCACTCCGATTCGAGAGCTGTTCTCCGGCACCCAAGAGTCT
CGTTCACGTGGCTATAAGCCAGGGCGTTTCAGCTTTAACGTTCGTGGTGGCCGCTGTGAAGCTTGCCAAGGTGATGGTGT
TATCAAGGTTGAAATGCACTTTTTACCTGATGTTTACGTCCCTTGTGATGTGTGTAAAGGCAAGCGCTACAACCGTGAAA
CGTTAGAAGTACACTACAAAGGGAAGAGCATCGATGAAGTGCTAGAGATGACCGTTGAAGACGCTCATGAGTTTTTCGCT
CCTGTCCCTGTCATCGCGCGTAAACTGCAAACCTTAATGGATGTTGGTCTTTCTTATATCCGTTTAGGTCAAGCGGCCAC
CACCCTCTCTGGCGGTGAAGCACAACGGGTGAAACTGGCCCGTGAGTTGTCCAAACGCGATACGGGCAAAACCCTTTATA
TTTTGGATGAACCAACAACGGGCCTACACTTCCACGATATCCAGCAACTTTTGACCGTATTGCATCGCTTACGTGATCAT
GGCAACACCGTTGTCGTGATTGAGCATAATTTAGATGTGATCAAAACGGCCGATTGGATCATCGACTTAGGTCCAGAAGG
CGGCCAAGGTGGAGGGGAAATCATTGCCCAAGGAACACCTGAAGATGTGGCGCAGATCGAAGGTTCGCATACCGCACGCT
TCCTTAAGCCTATGTTGAAATAG

Domains

Predicted by InterProScan.

• UvrA DNA-binding domain (UvrA_DNA-bind) (289-396)

• UvrA interaction domain (UvrA_inter) (130-236)

• ABC transporter (ABC_tran) (622-859)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	58.068	100	0.582
uvrA	Streptococcus pneumoniae TIGR4	58.068	100	0.582
uvrA	Streptococcus pneumoniae D39	58.068	100	0.582