Detailed information
Bioinformatically predicted
Overview
| Name | dprB | Type | Machinery gene |
| Locus tag | HXS60_RS00840 | Genome accession | NZ_AP023042 |
| Coordinates | 151062..151457 (-) | Length | 131 a.a. |
| NCBI ID | WP_006563893.1 | Uniprot ID | A0A6J4CVV1 |
| Organism | Helicobacter suis strain NHP19-4004 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 146062..156457
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HXS60_RS00815 (NHP194004_01640) | - | 146251..146934 (+) | 684 | WP_006563897.1 | response regulator transcription factor | - |
| HXS60_RS00820 (NHP194004_01650) | - | 146936..148216 (+) | 1281 | WP_176486620.1 | ArsS family sensor histidine kinase | - |
| HXS60_RS00825 (NHP194004_01660) | - | 148213..149394 (+) | 1182 | WP_176486621.1 | amidophosphoribosyltransferase | - |
| HXS60_RS00830 (NHP194004_01670) | hemB | 149387..150358 (+) | 972 | WP_064430128.1 | porphobilinogen synthase | - |
| HXS60_RS00835 (NHP194004_01680) | - | 150358..151080 (+) | 723 | WP_006563894.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| HXS60_RS00840 (NHP194004_01690) | dprB | 151062..151457 (-) | 396 | WP_006563893.1 | Holliday junction resolvase RuvX | Machinery gene |
| HXS60_RS00845 (NHP194004_01700) | dprA | 151454..152263 (-) | 810 | WP_006563892.1 | DNA-processing protein DprA | Machinery gene |
| HXS60_RS00850 (NHP194004_01710) | minE | 152251..152508 (-) | 258 | WP_034376430.1 | cell division topological specificity factor MinE | - |
| HXS60_RS00855 (NHP194004_01720) | minD | 152505..153305 (-) | 801 | WP_006563890.1 | septum site-determining protein MinD | - |
| HXS60_RS00860 (NHP194004_01730) | ilvC | 153314..154294 (-) | 981 | WP_006565235.1 | ketol-acid reductoisomerase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 14821.61 Da Isoelectric Point: 10.1350
>NTDB_id=80782 HXS60_RS00840 WP_006563893.1 151062..151457(-) (dprB) [Helicobacter suis strain NHP19-4004]
MIIACDIGLKRIGLAIYAQKIILPLNSIKRINRKQASLELLHLLETKKATKLIVGLPHACYTTRQRVLHFINLLNFAPVI
YVEEDNSSVEALTNLWHLSSKKRQKASKDGALDSLAACEILRRYLAQEMLV
MIIACDIGLKRIGLAIYAQKIILPLNSIKRINRKQASLELLHLLETKKATKLIVGLPHACYTTRQRVLHFINLLNFAPVI
YVEEDNSSVEALTNLWHLSSKKRQKASKDGALDSLAACEILRRYLAQEMLV
Nucleotide
Download Length: 396 bp
>NTDB_id=80782 HXS60_RS00840 WP_006563893.1 151062..151457(-) (dprB) [Helicobacter suis strain NHP19-4004]
ATGATCATCGCTTGTGATATTGGGCTTAAACGAATCGGTCTTGCGATTTATGCACAAAAAATTATTCTGCCCCTTAATTC
CATTAAACGGATTAATCGCAAACAAGCTAGTTTAGAATTACTCCATTTGCTAGAAACTAAAAAGGCCACAAAACTCATCG
TCGGATTGCCCCATGCCTGCTACACCACACGCCAACGCGTTTTACATTTTATTAATCTACTTAACTTTGCGCCTGTGATT
TATGTTGAGGAAGATAATAGCAGTGTAGAGGCGCTTACTAATCTTTGGCATTTATCTAGCAAAAAACGCCAAAAAGCCAG
CAAAGACGGCGCACTAGATAGTTTGGCTGCCTGTGAGATTTTAAGGCGCTATCTAGCTCAAGAAATGTTGGTATAA
ATGATCATCGCTTGTGATATTGGGCTTAAACGAATCGGTCTTGCGATTTATGCACAAAAAATTATTCTGCCCCTTAATTC
CATTAAACGGATTAATCGCAAACAAGCTAGTTTAGAATTACTCCATTTGCTAGAAACTAAAAAGGCCACAAAACTCATCG
TCGGATTGCCCCATGCCTGCTACACCACACGCCAACGCGTTTTACATTTTATTAATCTACTTAACTTTGCGCCTGTGATT
TATGTTGAGGAAGATAATAGCAGTGTAGAGGCGCTTACTAATCTTTGGCATTTATCTAGCAAAAAACGCCAAAAAGCCAG
CAAAGACGGCGCACTAGATAGTTTGGCTGCCTGTGAGATTTTAAGGCGCTATCTAGCTCAAGAAATGTTGGTATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprB | Helicobacter pylori 26695 |
51.587 |
96.183 |
0.496 |