Detailed information    

insolico Bioinformatically predicted

Overview

Name   degQ   Type   Regulator
Locus tag   P3X63_RS17415 Genome accession   NZ_CP120679
Coordinates   3361323..3361463 (-) Length   46 a.a.
NCBI ID   WP_026588584.1    Uniprot ID   A0A6I7F9L4
Organism   Bacillus sp. HSf4     
Function   modification of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3356323..3366463
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P3X63_RS17390 (P3X63_17390) - 3356619..3357008 (-) 390 WP_026588579.1 hotdog fold thioesterase -
  P3X63_RS17395 (P3X63_17395) comA 3357028..3357666 (-) 639 WP_026588580.1 response regulator transcription factor Regulator
  P3X63_RS17400 (P3X63_17400) comP 3357753..3360059 (-) 2307 WP_026588581.1 ATP-binding protein Regulator
  P3X63_RS17405 (P3X63_17405) comX 3360082..3360246 (-) 165 WP_026588582.1 competence pheromone ComX -
  P3X63_RS17410 (P3X63_17410) - 3360255..3361136 (-) 882 WP_026588583.1 polyprenyl synthetase family protein -
  P3X63_RS17415 (P3X63_17415) degQ 3361323..3361463 (-) 141 WP_026588584.1 degradation enzyme regulation protein DegQ Regulator
  P3X63_RS17420 (P3X63_17420) - 3361958..3362287 (+) 330 WP_026588585.1 hypothetical protein -
  P3X63_RS17425 (P3X63_17425) - 3362337..3363554 (-) 1218 WP_026588586.1 HDOD domain-containing protein -
  P3X63_RS17430 (P3X63_17430) - 3363719..3365188 (-) 1470 WP_026588587.1 nicotinate phosphoribosyltransferase -
  P3X63_RS17435 (P3X63_17435) - 3365206..3365757 (-) 552 WP_026588588.1 isochorismatase family cysteine hydrolase -
  P3X63_RS17440 (P3X63_17440) - 3365910..3366308 (-) 399 WP_026588589.1 YueI family protein -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5733.54 Da        Isoelectric Point: 8.4596

>NTDB_id=807687 P3X63_RS17415 WP_026588584.1 3361323..3361463(-) (degQ) [Bacillus sp. HSf4]
MEKQQIEELKQLLWRLENEIRETKDSLRKINKSIDQYDKYTYLKSS

Nucleotide


Download         Length: 141 bp        

>NTDB_id=807687 P3X63_RS17415 WP_026588584.1 3361323..3361463(-) (degQ) [Bacillus sp. HSf4]
GTGGAAAAGCAACAAATTGAAGAATTAAAGCAATTGCTTTGGCGGCTGGAAAATGAAATCAGAGAAACAAAGGACTCCTT
GCGCAAGATTAACAAAAGCATTGATCAATACGACAAATACACATATTTGAAATCCTCTTAA

Domains

Predicted by InterproScan.

DegQ (SacQ) family (DegQ)

(1-46)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6I7F9L4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degQ Bacillus subtilis subsp. subtilis str. 168

71.429

91.304

0.652