Detailed information NTG0807674

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: RM376_RS00880
• Genome accession: NZ_CP134717
• Coordinates: 185017..186000 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196477.1
• Uniprot ID: A0A0H2VBW7
• Organism: Escherichia coli strain RIVM_C036204
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 180017..191000

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RM376_RS00865 (RM376_00865)	dppA	181161..182768 (+)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-
RM376_RS00870 (RM376_00870)	dppB	183075..184094 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
RM376_RS00875 (RM376_00875)	dppC	184104..185006 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
RM376_RS00880 (RM376_00880)	amiE	185017..186000 (+)	984	WP_001196477.1	dipeptide ABC transporter ATP-binding protein	Regulator
RM376_RS00885 (RM376_00885)	dppF	185997..187001 (+)	1005	WP_000103577.1	dipeptide ABC transporter ATP-binding subunit DppF	-
RM376_RS00890 (RM376_00890)	yhjV	187031..188302 (-)	1272	WP_001298005.1	aromatic amino acid transport family protein	-
RM376_RS00895 (RM376_00895)	ldrD	188778..188885 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
RM376_RS00900 (RM376_00900)	bcsG	188972..190651 (-)	1680	WP_000191565.1	cellulose biosynthesis protein BcsG	-
RM376_RS00905 (RM376_00905)	bcsF	190648..190839 (-)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35801.38 Da
• Isoelectric Point: 6.5813

>NTDB_id=807674 RM376_RS00880 WP_001196477.1 185017..186000(+) (amiE) [Escherichia coli strain RIVM_C036204]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=807674 RM376_RS00880 WP_001196477.1 185017..186000(+) (amiE) [Escherichia coli strain RIVM_C036204]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCAATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAACCGACCACTGCGCTGGACGTGAC
CATCCAGGCGCAAATCATCGAACTGCTGCTGGAGTTGCAGCAGAAAGAGAACATGGCGCTGGTGTTGATCACTCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

3D structure

• AlphaFold DB: A0A0H2VBW7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404