Detailed information    

insolico Bioinformatically predicted

Overview

Name   comK   Type   Regulator
Locus tag   P3X63_RS06165 Genome accession   NZ_CP120679
Coordinates   1208612..1209190 (+) Length   192 a.a.
NCBI ID   WP_026586304.1    Uniprot ID   A0A6I7EZ58
Organism   Bacillus sp. HSf4     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1203612..1214190
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P3X63_RS06145 (P3X63_06145) - 1204128..1205420 (-) 1293 WP_026586300.1 globin-coupled sensor protein -
  P3X63_RS06150 (P3X63_06150) - 1205515..1207044 (-) 1530 WP_277692602.1 FAD-dependent oxidoreductase -
  P3X63_RS06155 (P3X63_06155) - 1207179..1208036 (+) 858 WP_026586302.1 SDR family oxidoreductase -
  P3X63_RS06160 (P3X63_06160) - 1208102..1208335 (-) 234 WP_026586303.1 IDEAL domain-containing protein -
  P3X63_RS06165 (P3X63_06165) comK 1208612..1209190 (+) 579 WP_026586304.1 competence protein ComK Regulator
  P3X63_RS06170 (P3X63_06170) - 1209184..1209549 (-) 366 WP_026586305.1 hypothetical protein -
  P3X63_RS06175 (P3X63_06175) - 1209754..1210365 (+) 612 WP_035427984.1 TVP38/TMEM64 family protein -
  P3X63_RS06180 (P3X63_06180) lepB 1210378..1210893 (+) 516 WP_026586307.1 signal peptidase I -
  P3X63_RS06185 (P3X63_06185) - 1210947..1212719 (-) 1773 WP_277692603.1 S8 family serine peptidase -

Sequence

Protein


Download         Length: 192 a.a.        Molecular weight: 22405.62 Da        Isoelectric Point: 8.1267

>NTDB_id=807645 P3X63_RS06165 WP_026586304.1 1208612..1209190(+) (comK) [Bacillus sp. HSf4]
MSTEDMTMDSYEVNRSTMAVLPLGEGEIPASKVLETERTFRVNMRPFQIIERSCRYFGSSYAGRKAGTYEVIKVSHKPPI
MVDHSNNIFLFPTFSSTRPQCGWLSHAHVHEFCAAKYDNTCVTFVNGETLELPVSITSFENQVYRTAWLRTKFQDRIEGG
AMQKKQEFMLYPKEDRNQLIYEFILRELKKRY

Nucleotide


Download         Length: 579 bp        

>NTDB_id=807645 P3X63_RS06165 WP_026586304.1 1208612..1209190(+) (comK) [Bacillus sp. HSf4]
ATGAGCACAGAGGATATGACAATGGATTCGTATGAAGTAAACCGTTCGACAATGGCCGTTCTGCCTCTGGGAGAGGGGGA
AATACCCGCTTCAAAAGTACTTGAAACCGAAAGGACATTCAGGGTCAATATGAGACCTTTTCAAATCATAGAAAGAAGCT
GCCGTTATTTCGGCTCAAGCTATGCCGGAAGAAAAGCCGGCACGTATGAAGTGATTAAGGTTTCCCACAAGCCGCCGATC
ATGGTGGACCATTCAAACAACATTTTTCTTTTTCCCACATTCTCCTCAACGAGGCCTCAGTGCGGGTGGCTTTCCCATGC
ACATGTTCACGAATTTTGCGCGGCGAAATATGACAATACATGCGTCACGTTTGTGAACGGGGAAACGTTGGAGCTGCCCG
TGTCCATCACATCTTTCGAGAATCAGGTTTACCGAACGGCATGGCTGAGAACCAAATTTCAGGACAGGATTGAAGGCGGA
GCCATGCAGAAAAAGCAGGAATTTATGCTTTATCCGAAAGAAGACCGAAACCAGCTGATCTACGAGTTCATCCTCAGAGA
GCTGAAAAAGCGCTACTGA

Domains

Predicted by InterproScan.

ComK protein (ComK)

(9-157)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6I7EZ58

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comK Bacillus subtilis subsp. subtilis str. 168

68.254

98.438

0.672