Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   P3X63_RS04720 Genome accession   NZ_CP120679
Coordinates   950288..951079 (+) Length   263 a.a.
NCBI ID   WP_077735287.1    Uniprot ID   -
Organism   Bacillus sp. HSf4     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 945288..956079
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P3X63_RS04690 (P3X63_04690) - 946500..947399 (+) 900 WP_277692532.1 PhzF family phenazine biosynthesis isomerase -
  P3X63_RS04695 (P3X63_04695) - 947487..948071 (+) 585 WP_277692533.1 nitroreductase -
  P3X63_RS04700 (P3X63_04700) - 948103..948297 (-) 195 WP_026589527.1 YfhD family protein -
  P3X63_RS04705 (P3X63_04705) - 948367..948480 (-) 114 WP_077735289.1 YfhE family protein -
  P3X63_RS04710 (P3X63_04710) - 948546..949085 (-) 540 WP_277692534.1 GNAT family N-acetyltransferase -
  P3X63_RS04715 (P3X63_04715) - 949320..950222 (-) 903 WP_277692535.1 TIGR01777 family oxidoreductase -
  P3X63_RS04720 (P3X63_04720) recX 950288..951079 (+) 792 WP_077735287.1 recombination regulator RecX Regulator
  P3X63_RS04725 (P3X63_04725) - 951084..951398 (+) 315 WP_026589523.1 YfhH family protein -
  P3X63_RS04730 (P3X63_04730) - 951427..951597 (-) 171 WP_077735286.1 YpzG family protein -
  P3X63_RS04735 (P3X63_04735) - 951624..951773 (-) 150 WP_003179924.1 small, acid-soluble spore protein K -
  P3X63_RS04740 (P3X63_04740) - 951903..952160 (+) 258 WP_026589522.1 YfhJ family protein -
  P3X63_RS04745 (P3X63_04745) - 952144..953295 (+) 1152 WP_277692536.1 FAD-dependent oxidoreductase -
  P3X63_RS04750 (P3X63_04750) - 953507..954466 (+) 960 WP_026589520.1 glycosyltransferase family 2 protein -
  P3X63_RS04755 (P3X63_04755) - 954435..954836 (+) 402 WP_077735285.1 GtrA family protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30445.71 Da        Isoelectric Point: 6.7694

>NTDB_id=807641 P3X63_RS04720 WP_077735287.1 950288..951079(+) (recX) [Bacillus sp. HSf4]
MPYITKISAQKNNEERVNIFLDEKYAFSVDLDVLVKFDLRKGKELDELDIIEIQYGDDIKKGFHKALDFLSYRMRSTKEV
KDHLKKKGVADSAITEIIHMLNDYKYLDDREFAQAFVSTHRKTSGKGPDVLYRELKLKGVDEEHIQEALSSFTFSEQVAT
AVKHAEKMLKKGKKLSSKETKQAIEQQLMRKGFSFDVISAALLETDYENNDDAEREALDKQGEKAMKRCGYDGSYETKMK
VKQYLFRKGFSIDMIDQFLDEKG

Nucleotide


Download         Length: 792 bp        

>NTDB_id=807641 P3X63_RS04720 WP_077735287.1 950288..951079(+) (recX) [Bacillus sp. HSf4]
ATGCCGTATATAACAAAAATTTCTGCCCAGAAAAACAATGAAGAGCGGGTCAATATTTTTCTTGATGAAAAATACGCCTT
CAGCGTTGACCTTGATGTTCTCGTCAAGTTTGATCTGCGAAAAGGAAAAGAGCTTGATGAGCTGGACATCATCGAAATCC
AGTATGGCGACGACATTAAAAAAGGCTTTCATAAAGCGCTTGATTTTTTGTCCTACAGAATGCGCTCGACAAAAGAAGTC
AAAGACCACTTGAAGAAAAAGGGAGTCGCGGATTCTGCGATCACAGAAATCATTCATATGCTGAATGACTACAAATATTT
GGACGACCGGGAATTTGCCCAAGCTTTCGTGAGCACCCACCGGAAAACGAGCGGCAAAGGGCCGGATGTTCTATACAGAG
AGCTGAAATTAAAAGGGGTTGATGAAGAACACATCCAGGAAGCATTAAGCTCGTTTACGTTTTCCGAACAGGTTGCAACC
GCGGTTAAGCACGCTGAAAAGATGCTGAAAAAAGGAAAAAAACTCTCCTCTAAAGAAACGAAACAGGCCATCGAACAACA
GCTTATGCGAAAGGGGTTCTCCTTCGACGTCATCTCGGCCGCTCTGCTGGAGACGGATTATGAAAACAATGACGACGCGG
AAAGAGAAGCGCTTGACAAACAAGGGGAAAAAGCCATGAAACGCTGCGGTTATGACGGTTCATATGAAACGAAAATGAAG
GTCAAGCAGTATTTGTTTAGAAAAGGCTTTTCCATAGACATGATTGATCAATTTCTAGATGAAAAGGGATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

69.349

99.24

0.688